Difference between revisions of "TSS:Hg 100295.1"
From referenceTSS
| Line 11: | Line 11: | ||
|entrez_id=1993 | |entrez_id=1993 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| − | |gene_alias=HEL-N1 | + | |gene_alias=HEL-N1{{!}}HELN1{{!}}HUB |
|gene_description=ELAV like RNA binding protein 2 | |gene_description=ELAV like RNA binding protein 2 | ||
|gene_id=1993 | |gene_id=1993 | ||
Revision as of 16:14, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23825961 |
|---|---|
| End of the center position in the TSS region: | 23825962 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF385423 MA621000 AB209294 |
|---|---|
| Distance: | -100 |
| Num_trans: | 26 |
| All_trans: | LF385423:-100 MA621000:-100 AB209294:-100 LF355725:106 MA591302:106 LF355724:188 MA591301:188 ENST00000462649.1:-209 ENST00000397312.7:-275 NM_001351455:-275 NM_001351472:-275 NM_004432:-275 NM_001351468:-275 NM_001351467:-275 NM_001351464:-275 NM_001351463:-275 NM_001351477:-275 NM_001351457:-275 NM_001351461:-275 LF355723:289 MA591300:289 U12431:-338 U29943:-338 ENST00000380117.5:-372 LF355722:400 MA591299:400 |
TATA-Box annotation
| Distance to TSS: | 278 |
|---|---|
| Nearest PromoterID: | NM_001351467 |
| Entrez ID: | 1993 |
| Nearest Unigene: | Hs.166109 |
| Nearest Refseq: | NM_004432 |
| Nearest Ensembl: | ENSG00000107105 |
| Gene Name: | ELAV like RNA binding protein 2 |
| Gene Alias: | HEL-N1|HELN1|HUB |
| Gene Description: | ELAV like RNA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -82(GTCTTTTTAAAC,-,0.00),-80(CTTTTTAAACTC,+,0.00),23(TCTTTTAAGCCG,+,0.00) |
