Difference between revisions of "TSS:Hg 100388.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |RIG1= | ||
|RIGI= | |RIGI= | ||
|RLR-1= | |RLR-1= | ||
| Line 12: | Line 13: | ||
|entrez_id=23586 | |entrez_id=23586 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=RIG-I | + | |gene_alias=RIG-I{{!}}RIG1{{!}}RIGI{{!}}RLR-1{{!}}SGMRT2 |
|gene_description=DExD/H-box helicase 58 | |gene_description=DExD/H-box helicase 58 | ||
|gene_id=23586 | |gene_id=23586 | ||
Revision as of 16:16, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 32526224 |
|---|---|
| End of the center position in the TSS region: | 32526225 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379883.3 ENST00000379868.6 ENST00000679771.1 ENST00000680733.1 ENST00000679859.1 NM_014314 BC070029 AK315040 AK301678 BX647917 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000379883.3:0 ENST00000379868.6:0 ENST00000679771.1:0 ENST00000680733.1:0 ENST00000679859.1:0 NM_014314:0 BC070029:0 AK315040:0 AK301678:0 BX647917:0 BC132786:-9 BC136610:-9 AB385150:20 ENST00000680883.1:23 ENST00000679662.1:23 LF383856:-61 MA619433:-61 AF038963:-61 LQ878892:-61 BC107731:-80 |
TATA-Box annotation
| Distance to TSS: | -29 |
|---|---|
| Nearest PromoterID: | NM_014314 |
| Entrez ID: | 23586 |
| Nearest Unigene: | Hs.190622 |
| Nearest Refseq: | NM_014314 |
| Nearest Ensembl: | ENSG00000107201 |
| Gene Name: | DExD/H-box helicase 58 |
| Gene Alias: | RIG-I|RIG1|RIGI|RLR-1|SGMRT2 |
| Gene Description: | DExD/H-box helicase 58 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -4(CGGCTTTAAAGC,-,0.00) |
