Difference between revisions of "TSS:Hg 100406.1"
From referenceTSS
| Line 14: | Line 14: | ||
|entrez_id=54840 | |entrez_id=54840 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=AOA | + | |gene_alias=AOA{{!}}AOA1{{!}}AXA1{{!}}EAOH{{!}}EOAHA{{!}}FHA-HIT |
|gene_description=aprataxin | |gene_description=aprataxin | ||
|gene_id=54840 | |gene_id=54840 | ||
Revision as of 16:16, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33001607 |
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| End of the center position in the TSS region: | 33001608 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000672846.1 ENST00000672519.1 ENST00000672244.1 ENST00000673416.1 ENST00000379825.7 ENST00000397172.8 ENST00000379817.7 ENST00000465003.6 ENST00000472896.6 ENST00000479656.6 ENST00000483148.6 ENST00000672438.1 ENST00000673598.1 ENST00000309615.8 ENST00000379819.6 ENST00000672286.1 ENST00000474658.7 ENST00000672535.1 ENST00000476858.6 ENST00000379813.7 ENST00000477119.2 ENST00000671912.1 ENST00000464632.6 ENST00000478279.6 ENST00000480031.6 ENST00000460945.6 ENST00000494973.1 ENST00000672553.1 NM_001195251 NM_175073 NR_036577 NM_001195249 NM_001195254 NM_001368998 NM_001369006 NM_001369005 NM_001369004 NM_175069 NM_001195248 NM_001195250 NM_001195252 NR_160921 NR_160920 NR_160931 NR_160930 NM_001370673 NM_001370669 NM_001370670 LF383857 MA619434 AK131046 AY208831 AK055672 AY040777 BX538161 AY208837 AY208829 AY208840 AY208830 BC068107 AY208834 AY208832 AB528955 AJ565850 AJ565851 AJ565852 |
|---|---|
| Distance: | 0 |
| Num_trans: | 74 |
| All_trans: | ENST00000672846.1:0 ENST00000672519.1:0 ENST00000672244.1:0 ENST00000673416.1:0 ENST00000379825.7:0 ENST00000397172.8:0 ENST00000379817.7:0 ENST00000465003.6:0 ENST00000472896.6:0 ENST00000479656.6:0 ENST00000483148.6:0 ENST00000672438.1:0 ENST00000673598.1:0 ENST00000309615.8:0 ENST00000379819.6:0 ENST00000672286.1:0 ENST00000474658.7:0 ENST00000672535.1:0 ENST00000476858.6:0 ENST00000379813.7:0 ENST00000477119.2:0 ENST00000671912.1:0 ENST00000464632.6:0 ENST00000478279.6:0 ENST00000480031.6:0 ENST00000460945.6:0 ENST00000494973.1:0 ENST00000672553.1:0 NM_001195251:0 NM_175073:0 NR_036577:0 NM_001195249:0 NM_001195254:0 NM_001368998:0 NM_001369006:0 NM_001369005:0 NM_001369004:0 NM_175069:0 NM_001195248:0 NM_001195250:0 NM_001195252:0 NR_160921:0 NR_160920:0 NR_160931:0 NR_160930:0 NM_001370673:0 NM_001370669:0 NM_001370670:0 LF383857:0 MA619434:0 AK131046:0 AY208831:0 AK055672:0 AY040777:0 BX538161:0 AY208837:0 AY208829:0 AY208840:0 AY208830:0 BC068107:0 AY208834:0 AY208832:0 AB528955:0 AJ565850:0 AJ565851:0 AJ565852:0 AY208833:5 LF354212:-11 MA589789:-11 AY208835:25 ENST00000463596.6:48 AY208836:48 ENST00000494649.5:49 AY208839:49 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001195254 |
| Entrez ID: | 54840 |
| Nearest Unigene: | Hs.20158 |
| Nearest Refseq: | NM_017692 |
| Nearest Ensembl: | ENSG00000137074 |
| Gene Name: | aprataxin |
| Gene Alias: | AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT |
| Gene Description: | aprataxin |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
