Difference between revisions of "TSS:Hg 100561.1"
From referenceTSS
| Line 15: | Line 15: | ||
|entrez_id=7415 | |entrez_id=7415 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=CDC48 | + | |gene_alias=CDC48{{!}}TERA{{!}}p97 |
|gene_description=valosin containing protein | |gene_description=valosin containing protein | ||
|gene_id=7415 | |gene_id=7415 | ||
Revision as of 16:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35072611 |
|---|---|
| End of the center position in the TSS region: | 35072612 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000679902.1 ENST00000679800.1 ENST00000677257.1 ENST00000678465.1 ENST00000358901.11 ENST00000681335.1 ENST00000680916.1 ENST00000679599.1 ENST00000679862.1 ENST00000681690.1 ENST00000676836.2 ENST00000480327.2 ENST00000680079.1 ENST00000681386.1 ENST00000679392.1 ENST00000680575.1 ENST00000680108.1 NM_007126 BC096751 AK312310 |
|---|---|
| Distance: | 0 |
| Num_trans: | 42 |
| All_trans: | ENST00000679902.1:0 ENST00000679800.1:0 ENST00000677257.1:0 ENST00000678465.1:0 ENST00000358901.11:0 ENST00000681335.1:0 ENST00000680916.1:0 ENST00000679599.1:0 ENST00000679862.1:0 ENST00000681690.1:0 ENST00000676836.2:0 ENST00000480327.2:0 ENST00000680079.1:0 ENST00000681386.1:0 ENST00000679392.1:0 ENST00000680575.1:0 ENST00000680108.1:0 NM_007126:0 BC096751:0 AK312310:0 BC012195:-5 BC017171:-5 BC021055:-5 ENST00000679647.1:-10 ENST00000678018.1:21 FJ224344:22 AF100752:22 FJ224352:22 ENST00000678650.1:28 ENST00000679901.1:28 ENST00000448530.6:-33 NM_001354927:-33 BC110913:37 ENST00000493886.5:40 BC122550:40 BC121794:40 LF211620:48 MA447197:48 ENST00000679204.2:147 AB385152:232 NM_001354928:281 ENST00000417448.2:384 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_007126 |
| Entrez ID: | 7415 |
| Nearest Unigene: | Hs.529782 |
| Nearest Refseq: | NM_007126 |
| Nearest Ensembl: | ENSG00000165280 |
| Gene Name: | valosin containing protein |
| Gene Alias: | CDC48|TERA|p97 |
| Gene Description: | valosin containing protein |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
