Difference between revisions of "TSS:Hg 100719.1"
From referenceTSS
| Line 10: | Line 10: | ||
|entrez_id=5079 | |entrez_id=5079 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=ALL3 | + | |gene_alias=ALL3{{!}}BSAP |
|gene_description=paired box 5 | |gene_description=paired box 5 | ||
|gene_id=5079 | |gene_id=5079 | ||
Revision as of 16:23, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 37034267 |
|---|---|
| End of the center position in the TSS region: | 37034268 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000358127.9 ENST00000377852.7 ENST00000523241.6 NM_001280548 NM_001280556 NM_001280547 NR_104000 NM_016734 NM_001280550 NM_001280554 NM_001280553 NM_001280552 NM_001280551 NM_001280549 NM_001280555 NR_103999 |
|---|---|
| Distance: | 0 |
| Num_trans: | 43 |
| All_trans: | ENST00000358127.9:0 ENST00000377852.7:0 ENST00000523241.6:0 NM_001280548:0 NM_001280556:0 NM_001280547:0 NR_104000:0 NM_016734:0 NM_001280550:0 NM_001280554:0 NM_001280553:0 NM_001280552:0 NM_001280551:0 NM_001280549:0 NM_001280555:0 NR_103999:0 ENST00000520154.6:77 M96944:156 ENST00000377853.6:221 ENST00000377840.6:221 AY463952:221 AY463953:221 AY463954:221 AY463955:221 AY463956:221 AY463957:221 ENST00000520281.5:231 ENST00000446742.5:231 ENST00000522003.5:231 ENST00000523145.5:231 ENST00000523493.5:231 ENST00000414447.5:231 ENST00000377847.6:231 FJ626419:231 FJ626420:231 FJ626421:231 FJ626422:231 FJ626423:231 FJ626424:231 FJ626425:231 BC156189:231 BC156927:231 AB529192:231 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001280547 |
| Entrez ID: | 5079 |
| Nearest Unigene: | Hs.654464 |
| Nearest Refseq: | NM_016734 |
| Nearest Ensembl: | ENSG00000196092 |
| Gene Name: | paired box 5 |
| Gene Alias: | ALL3|BSAP |
| Gene Description: | paired box 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
