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Difference between revisions of "TSS:Hg 100763.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC029953:87 ENST00000540557.1:118 BC136581:-254 BC136582:-254 X75342:-379 ENST00000377707.4:-395 NM_003028:-395 BC094765:-420
+
|all_trans=HGNC:10838
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.135
 
|cpg_percent=0.135
Line 22: Line 22:
 
|nearest_refseq=NM_003028
 
|nearest_refseq=NM_003028
 
|nearest_unigene=Hs.521482
 
|nearest_unigene=Hs.521482
|num_trans=8
+
|num_trans=6461
 
|species=human
 
|species=human
 
|start=38068804
 
|start=38068804

Latest revision as of 17:50, 19 July 2021

Basic information about the TSS


TSS ID:hg_100763.1
Species:human
Chr:chr9
TSS Classification:yes
Start:38068804
End:38068832
Strand:-
TSS Score:1
Start of the center position in the TSS region:38068818
End of the center position in the TSS region:38068819



Gene and protein annotation


Transcript_name:BC029953
Distance:87
GeneID:6461
HGNC/MGI_ID:HGNC:10838
UniProt_ID:
Gene_name:SH2 domain containing adaptor protein B
Gene_symbol:SHB
Gene_synonyms:
Gene_source:HGNC:10838



Transcript annotation


Transcript_name:BC029953
Distance:87
Num_trans:6461
All_trans:HGNC:10838



TATA-Box annotation


Distance to TSS:409
Nearest PromoterID:NM_003028
Entrez ID:6461
Nearest Unigene:Hs.521482
Nearest Refseq:NM_003028
Nearest Ensembl:ENSG00000107338
Gene Name:SH2 domain containing adaptor protein B
Gene Alias:bA3J10.2
Gene Description:SH2 domain containing adaptor protein B
Gene Type:protein-coding
CpG%:0.135
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):