Difference between revisions of "TSS:Hg 100146.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance=- | + | |distance=-40 |
|distance_to_tss=61 | |distance_to_tss=61 | ||
|end=19049299 | |end=19049299 | ||
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|tata_box=-35(GCCTTGAAAAGC,-,0.00) | |tata_box=-35(GCCTTGAAAAGC,-,0.00) | ||
| − | |transcript_name= | + | |transcript_name=NM_001287049.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100146.1 | |tss_id=hg_100146.1 | ||
Latest revision as of 17:36, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19049292 |
|---|---|
| End of the center position in the TSS region: | 19049293 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001287049.2 |
|---|---|
| Distance: | -40 |
| Num_trans: | 3 |
| All_trans: | ENST00000542071.2:-55 NM_001287049:-55 ENST00000649457.1:-59 |
TATA-Box annotation
| Distance to TSS: | 61 |
|---|---|
| Nearest PromoterID: | NM_001287049 |
| Entrez ID: | 158297 |
| Nearest Unigene: | Hs.731593 |
| Nearest Refseq: | NM_153707 |
| Nearest Ensembl: | ENSG00000155875 |
| Gene Name: | stabilizer of axonemal microtubules 1 |
| Gene Alias: | C9orf138|FAM154A |
| Gene Description: | stabilizer of axonemal microtubules 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GCCTTGAAAAGC,-,0.00) |
