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Difference between revisions of "TSS:Hg 101066.1"

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Line 3: Line 3:
 
|C9orf65=
 
|C9orf65=
 
|KIAA0367=
 
|KIAA0367=
|all_trans=ENST00000376718.8:84 NM_015225:84 ENST00000492157.5:111 NM_001308048:111 NR_131751:111 NM_001308047:111 LP896548:111 BC019095:111 ENST00000376713.3:113 ENST00000443509.6:157 ENST00000428286.5:157 FJ808772:157 FJ808773:157 KJ903913:234 AB535152:235
+
|all_trans=HGNC:25209
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 25: Line 25:
 
|nearest_refseq=NM_015225
 
|nearest_refseq=NM_015225
 
|nearest_unigene=Hs.262857
 
|nearest_unigene=Hs.262857
|num_trans=15
+
|num_trans=158471
 
|species=human
 
|species=human
 
|start=76906197
 
|start=76906197
 
|start_of_center_position=76906201
 
|start_of_center_position=76906201
 
|strand=-
 
|strand=-
|transcript_name=ENST00000376718.8 NM_015225
+
|transcript_name=ENST00000376718.8
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_101066.1
 
|tss_id=hg_101066.1

Latest revision as of 17:57, 19 July 2021

Basic information about the TSS


TSS ID:hg_101066.1
Species:human
Chr:chr9
TSS Classification:yes
Start:76906197
End:76906206
Strand:-
TSS Score:1
Start of the center position in the TSS region:76906201
End of the center position in the TSS region:76906202



Gene and protein annotation


Transcript_name:ENST00000376718.8
Distance:84
GeneID:158471
HGNC/MGI_ID:HGNC:25209
UniProt_ID:Q8WUY3
Gene_name:prune homolog 2 with BCH domain
Gene_symbol:PRUNE2
Gene_synonyms:A214N16.3 BMCC1 BNIPXL bA214N16.3
Gene_source:HGNC:25209



Transcript annotation


Transcript_name:ENST00000376718.8
Distance:84
Num_trans:158471
All_trans:HGNC:25209



TATA-Box annotation


Distance to TSS:-88
Nearest PromoterID:NM_015225
Entrez ID:158471
Nearest Unigene:Hs.262857
Nearest Refseq:NM_015225
Nearest Ensembl:ENSG00000106772
Gene Name:prune homolog 2 with BCH domain
Gene Alias:BMCC1|BNIPXL|C9orf65|KIAA0367
Gene Description:prune homolog 2 with BCH domain
Gene Type:protein-coding
CpG%:0.13
GC%:0.776119
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):