Personal tools

Difference between revisions of "TSS:Hg 10117.1"

From referenceTSS

Jump to: navigation, search
 
Line 4: Line 4:
 
|DNB1=
 
|DNB1=
 
|NEDBEH=
 
|NEDBEH=
|all_trans=ENST00000476556.5:31 ENST00000492766.5:31 AF016005:31 NM_001042682:-83 ENST00000460659.5:278 ENST00000465125.1:-485
+
|all_trans=HGNC:9965
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.18
 
|cpg_percent=0.18
Line 26: Line 26:
 
|nearest_refseq=NM_012102
 
|nearest_refseq=NM_012102
 
|nearest_unigene=Hs.463041
 
|nearest_unigene=Hs.463041
|num_trans=6
+
|num_trans=473
 
|species=human
 
|species=human
 
|start=8423696
 
|start=8423696

Latest revision as of 17:59, 19 July 2021

Basic information about the TSS


TSS ID:hg_10117.1
Species:human
Chr:chr1
TSS Classification:yes
Start:8423696
End:8423749
Strand:-
TSS Score:1
Start of the center position in the TSS region:8423722
End of the center position in the TSS region:8423723



Gene and protein annotation


Transcript_name:ENST00000476556.5 ENST00000492766.5 AF016005
Distance:31
GeneID:473
HGNC/MGI_ID:HGNC:9965
UniProt_ID:Q9P2R6
Gene_name:arginine-glutamic acid dipeptide repeats
Gene_symbol:RERE
Gene_synonyms:ARG ARP ATN2 DNB1 KIAA0458
Gene_source:HGNC:9965



Transcript annotation


Transcript_name:ENST00000476556.5 ENST00000492766.5 AF016005
Distance:31
Num_trans:473
All_trans:HGNC:9965



TATA-Box annotation


Distance to TSS:109
Nearest PromoterID:NM_001042682
Entrez ID:473
Nearest Unigene:Hs.463041
Nearest Refseq:NM_012102
Nearest Ensembl:ENSG00000142599
Gene Name:arginine-glutamic acid dipeptide repeats
Gene Alias:ARG|ARP|ATN1L|DNB1|NEDBEH
Gene Description:arginine-glutamic acid dipeptide repeats
Gene Type:protein-coding
CpG%:0.18
GC%:0.840796
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):