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Difference between revisions of "TSS:Hg 101190.1"

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{{TSSDetail
 
{{TSSDetail
 
|NNA1=
 
|NNA1=
|all_trans=ENST00000376083.7:28 AB028958:-36 ENST00000376081.8:-38 ENST00000357081.8:-104 NM_001330701:-104 AK001544:-124 LP895626:-144 BC060815:-144 ENST00000337006.8:-179 ENST00000628899.1:-179 NM_001286715:-179 NM_001286717:-179 NM_015239:-179 AK295774:-179
+
|all_trans=HGNC:17258
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.14
 
|cpg_percent=0.14
Line 23: Line 23:
 
|nearest_refseq=NM_015239
 
|nearest_refseq=NM_015239
 
|nearest_unigene=Hs.719980
 
|nearest_unigene=Hs.719980
|num_trans=14
+
|num_trans=23287
 
|species=human
 
|species=human
 
|start=85741845
 
|start=85741845

Latest revision as of 17:59, 19 July 2021

Basic information about the TSS


TSS ID:hg_101190.1
Species:human
Chr:chr9
TSS Classification:yes
Start:85741845
End:85741850
Strand:-
TSS Score:1
Start of the center position in the TSS region:85741847
End of the center position in the TSS region:85741848



Gene and protein annotation


Transcript_name:ENST00000376083.7
Distance:28
GeneID:23287
HGNC/MGI_ID:HGNC:17258
UniProt_ID:A0A024R288
Gene_name:ATP/GTP binding carboxypeptidase 1
Gene_symbol:AGTPBP1
Gene_synonyms:CCP1 KIAA1035 Nna1
Gene_source:HGNC:17258



Transcript annotation


Transcript_name:ENST00000376083.7
Distance:28
Num_trans:23287
All_trans:HGNC:17258



TATA-Box annotation


Distance to TSS:181
Nearest PromoterID:NM_001286717
Entrez ID:23287
Nearest Unigene:Hs.719980
Nearest Refseq:NM_015239
Nearest Ensembl:ENSG00000135049
Gene Name:ATP/GTP binding carboxypeptidase 1
Gene Alias:CCP1|CONDCA|NNA1
Gene Description:ATP/GTP binding protein 1
Gene Type:protein-coding
CpG%:0.14
GC%:0.756219
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):