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Difference between revisions of "TSS:Hg 101258.1"

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Line 3: Line 3:
 
|P42=
 
|P42=
 
|PNQALRE=
 
|PNQALRE=
|all_trans=ENST00000459720.5:0 ENST00000486228.7:0 AF113130:0 BX647489:0 AF035013:0 AK291713:0 ENST00000375883.7:-40 NM_178432:-67 NM_001170640:-67 NM_012119:-67 ENST00000336654.9:83 ENST00000603475.1:138 AK226135:138 ENST00000325303.9:139 NM_001170639:139 NM_001039803:139 AK075325:139 AK294193:139 ENST00000604175.5:141 ENST00000605591.1:141 AK296328:141 AK298993:149 ENST00000605159.5:167 BC002655:167 ENST00000375871.8:185 AY904367:226 KU178572:226 KU178573:226 KU178574:226 KU178575:226 KU178576:226 KU178577:226
+
|all_trans=HGNC:21420
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.095
 
|cpg_percent=0.095
Line 25: Line 25:
 
|nearest_refseq=NM_012119
 
|nearest_refseq=NM_012119
 
|nearest_unigene=Hs.522274
 
|nearest_unigene=Hs.522274
|num_trans=32
+
|num_trans=23552
 
|species=human
 
|species=human
 
|start=87974671
 
|start=87974671

Latest revision as of 18:01, 19 July 2021

Basic information about the TSS


TSS ID:hg_101258.1
Species:human
Chr:chr9
TSS Classification:yes
Start:87974671
End:87974713
Strand:-
TSS Score:1
Start of the center position in the TSS region:87974692
End of the center position in the TSS region:87974693



Gene and protein annotation


Transcript_name:ENST00000459720.5 ENST00000486228.7 AF113130 BX647489 AF035013 AK291713
Distance:0
GeneID:23552
HGNC/MGI_ID:HGNC:21420
UniProt_ID:
Gene_name:cyclin dependent kinase 20
Gene_symbol:CDK20
Gene_synonyms:p42
Gene_source:HGNC:21420



Transcript annotation


Transcript_name:ENST00000459720.5 ENST00000486228.7 AF113130 BX647489 AF035013 AK291713
Distance:0
Num_trans:23552
All_trans:HGNC:21420



TATA-Box annotation


Distance to TSS:88
Nearest PromoterID:NM_001039803
Entrez ID:23552
Nearest Unigene:Hs.522274
Nearest Refseq:NM_012119
Nearest Ensembl:ENSG00000156345
Gene Name:cyclin dependent kinase 20
Gene Alias:CCRK|CDCH|P42|PNQALRE
Gene Description:cyclin dependent kinase 20
Gene Type:protein-coding
CpG%:0.095
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):