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Difference between revisions of "TSS:Hg 101478.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|NINJURIN=
 
|NINJURIN=
|all_trans=ENST00000375446.5:0 ENST00000470314.5:0 NM_004148:0 BC004440:0 BC000298:0 U72661:0 U91512:0 BC019336:0 ENST00000461162.5:16 ENST00000490564.1:16 BT007164:18 KJ891705:18 KJ897247:18 KR711305:18 CU690562:18 BC048212:-27
+
|all_trans=HGNC:7824
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.14
 
|cpg_percent=0.14
Line 23: Line 23:
 
|nearest_refseq=NM_004148
 
|nearest_refseq=NM_004148
 
|nearest_unigene=Hs.494457
 
|nearest_unigene=Hs.494457
|num_trans=16
+
|num_trans=4814
 
|species=human
 
|species=human
 
|start=93134234
 
|start=93134234
 
|start_of_center_position=93134247
 
|start_of_center_position=93134247
 
|strand=-
 
|strand=-
|transcript_name=ENST00000375446.5 ENST00000470314.5 NM_004148 BC004440 BC000298 U72661 U91512 BC019336
+
|transcript_name=ENST00000375446.5 ENST00000470314.5 BC004440 BC000298 U72661 U91512 BC019336
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_101478.1
 
|tss_id=hg_101478.1

Latest revision as of 18:06, 19 July 2021

Basic information about the TSS


TSS ID:hg_101478.1
Species:human
Chr:chr9
TSS Classification:yes
Start:93134234
End:93134261
Strand:-
TSS Score:1
Start of the center position in the TSS region:93134247
End of the center position in the TSS region:93134248



Gene and protein annotation


Transcript_name:ENST00000375446.5 ENST00000470314.5 BC004440 BC000298 U72661 U91512 BC019336
Distance:0
GeneID:4814
HGNC/MGI_ID:HGNC:7824
UniProt_ID:Q92982
Gene_name:ninjurin 1
Gene_symbol:NINJ1
Gene_synonyms:NIN1
Gene_source:HGNC:7824



Transcript annotation


Transcript_name:ENST00000375446.5 ENST00000470314.5 BC004440 BC000298 U72661 U91512 BC019336
Distance:0
Num_trans:4814
All_trans:HGNC:7824



TATA-Box annotation


Distance to TSS:3
Nearest PromoterID:NM_004148
Entrez ID:4814
Nearest Unigene:Hs.494457
Nearest Refseq:NM_004148
Nearest Ensembl:ENSG00000131669
Gene Name:ninjurin 1
Gene Alias:NIN1|NINJURIN
Gene Description:ninjurin 1
Gene Type:protein-coding
CpG%:0.14
GC%:0.800995
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):