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Difference between revisions of "TSS:Hg 101497.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000649557.1:0 ENST00000423591.5:0 ENST00000476484.5:0 NR_136238:0 NR_136237:0 NR_136236:0 NR_136235:0 NR_136234:0 NR_136233:0 NR_136232:0 NM_001322224:0 BC046183:0 ENST00000650398.1:17 ENST00000479094.5:23 ENST00000523407.1:23 BC038803:23 ENST00000520403.1:35 BC037551:50 BC063650:50 BC080634:73 DQ580956:243 ENST00000483056.5:339 ENST00000428152.1:433
+
|all_trans=HGNC:23389
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.175
 
|cpg_percent=0.175
Line 22: Line 22:
 
|nearest_refseq=NM_198841
 
|nearest_refseq=NM_198841
 
|nearest_unigene=Hs.350364
 
|nearest_unigene=Hs.350364
|num_trans=23
+
|num_trans=158293
 
|species=human
 
|species=human
 
|start=93451546
 
|start=93451546
 
|start_of_center_position=93451582
 
|start_of_center_position=93451582
 
|strand=-
 
|strand=-
|transcript_name=ENST00000649557.1 ENST00000423591.5 ENST00000476484.5 NR_136238 NR_136237 NR_136236 NR_136235 NR_136234 NR_136233 NR_136232 NM_001322224 BC046183
+
|transcript_name=ENST00000649557.1 ENST00000423591.5 ENST00000476484.5 BC046183
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_101497.1
 
|tss_id=hg_101497.1

Latest revision as of 18:06, 19 July 2021

Basic information about the TSS


TSS ID:hg_101497.1
Species:human
Chr:chr9
TSS Classification:yes
Start:93451546
End:93451619
Strand:-
TSS Score:1
Start of the center position in the TSS region:93451582
End of the center position in the TSS region:93451583



Gene and protein annotation


Transcript_name:ENST00000649557.1 ENST00000423591.5 ENST00000476484.5 BC046183
Distance:0
GeneID:158293
HGNC/MGI_ID:HGNC:23389
UniProt_ID:E5RJ17 E9PCY8
Gene_name:family with sequence similarity 120A opposite strand
Gene_symbol:FAM120AOS
Gene_synonyms:
Gene_source:HGNC:23389



Transcript annotation


Transcript_name:ENST00000649557.1 ENST00000423591.5 ENST00000476484.5 BC046183
Distance:0
Num_trans:158293
All_trans:HGNC:23389



TATA-Box annotation


Distance to TSS:25
Nearest PromoterID:NR_136237
Entrez ID:158293
Nearest Unigene:Hs.350364
Nearest Refseq:NM_198841
Nearest Ensembl:ENSG00000188938
Gene Name:family with sequence similarity 120A opposite strand
Gene Alias:C9orf10OS
Gene Description:family with sequence similarity 120A opposite strand
Gene Type:protein-coding
CpG%:0.175
GC%:0.830846
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):