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Difference between revisions of "TSS:Hg 101584.1"

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Line 3: Line 3:
 
|RAD26L=
 
|RAD26L=
 
|SR278=
 
|SR278=
|all_trans=ENST00000660143.1:-7 ENST00000433656.2:34 AF170307:34 ENST00000657579.1:-39 ENST00000429781.1:-43 ENST00000670189.1:-43 AK092137:-43 ENST00000671508.1:53 ENST00000427259.1:244 ENST00000660645.1:-416 ENST00000321517.3:-432 AF194971:-432 NR_023390:-433 NR_023389:-433 AL389954:-433 ENST00000669049.1:435 ENST00000448465.1:444
+
|all_trans=HGNC:27858
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 25: Line 25:
 
|nearest_refseq=NM_020207
 
|nearest_refseq=NM_020207
 
|nearest_unigene=Hs.432364
 
|nearest_unigene=Hs.432364
|num_trans=17
+
|num_trans=100128782
 
|species=human
 
|species=human
 
|start=95875513
 
|start=95875513

Latest revision as of 18:08, 19 July 2021

Basic information about the TSS


TSS ID:hg_101584.1
Species:human
Chr:chr9
TSS Classification:yes
Start:95875513
End:95875544
Strand:-
TSS Score:1
Start of the center position in the TSS region:95875528
End of the center position in the TSS region:95875529



Gene and protein annotation


Transcript_name:ENST00000660143.1
Distance:-7
GeneID:100128782
HGNC/MGI_ID:HGNC:27858
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 476
Gene_symbol:LINC00476
Gene_synonyms:
Gene_source:HGNC:27858



Transcript annotation


Transcript_name:ENST00000660143.1
Distance:-7
Num_trans:100128782
All_trans:HGNC:27858



TATA-Box annotation


Distance to TSS:-162
Nearest PromoterID:NM_020207
Entrez ID:375748
Nearest Unigene:Hs.432364
Nearest Refseq:NM_020207
Nearest Ensembl:ENSG00000182150
Gene Name:long intergenic non-protein coding RNA 476
Gene Alias:BMFS2|C9orf102|RAD26L|SR278
Gene Description:ERCC excision repair 6 like 2
Gene Type:protein-coding
CpG%:0.08
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):