Difference between revisions of "TSS:Hg 101638.1"
From referenceTSS
| Line 7: | Line 7: | ||
|TTF-2= | |TTF-2= | ||
|TTF2= | |TTF2= | ||
| − | |all_trans= | + | |all_trans=HGNC:44086 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_004473 | |nearest_refseq=NM_004473 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=101928337 |
|species=human | |species=human | ||
|start=97853172 | |start=97853172 | ||
| Line 35: | Line 35: | ||
|strand=- | |strand=- | ||
|tata_box=-32(CTCCTTAAAGGG,-,0.00),-30(CCTTAAAGGGGC,+,0.00) | |tata_box=-32(CTCCTTAAAGGG,-,0.00),-30(CCTTAAAGGGGC,+,0.00) | ||
| − | |transcript_name=ENST00000649461.1 ENST00000649526.1 ENST00000650104.1 | + | |transcript_name=ENST00000649461.1 ENST00000649526.1 ENST00000650104.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101638.1 | |tss_id=hg_101638.1 | ||
Latest revision as of 18:09, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 97853173 |
|---|---|
| End of the center position in the TSS region: | 97853174 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000649461.1 ENST00000649526.1 ENST00000650104.1 |
|---|---|
| Distance: | 93 |
| Num_trans: | 101928337 |
| All_trans: | HGNC:44086 |
TATA-Box annotation
| Distance to TSS: | -52 |
|---|---|
| Nearest PromoterID: | NM_004473 |
| Entrez ID: | 2304 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_004473 |
| Nearest Ensembl: | ENSG00000178919 |
| Gene Name: | papillary thyroid carcinoma susceptibility candidate 2 |
| Gene Alias: | FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2 |
| Gene Description: | forkhead box E1 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(CTCCTTAAAGGG,-,0.00),-30(CCTTAAAGGGGC,+,0.00) |
