Difference between revisions of "TSS:Hg 101969.1"
From referenceTSS
| Line 34: | Line 34: | ||
|start_of_center_position=111038213 | |start_of_center_position=111038213 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001387507.1 NM_001387502.1 NM_001351418.2 NM_001387501.1 NM_001387505.1 NM_001387509.1 NM_001387517.1 NM_001387511.1 NM_001387506.1 NM_001351417.2 NM_001351415.2 NM_001387508.1 NM_001351416.2 NM_001387504.1 NM_001387510.1 NM_001387503.1 NM_057159.4 NM_001401.5 NM_001387521.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101969.1 | |tss_id=hg_101969.1 | ||
Latest revision as of 18:16, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 111038213 |
|---|---|
| End of the center position in the TSS region: | 111038214 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001387507.1 NM_001387502.1 NM_001351418.2 NM_001387501.1 NM_001387505.1 NM_001387509.1 NM_001387517.1 NM_001387511.1 NM_001387506.1 NM_001351417.2 NM_001351415.2 NM_001387508.1 NM_001351416.2 NM_001387504.1 NM_001387510.1 NM_001387503.1 NM_057159.4 NM_001401.5 NM_001387521.1 |
|---|---|
| Distance: | 101 |
| Num_trans: | 28 |
| All_trans: | NM_001401:101 NM_057159:101 NM_001351418:101 NM_001351417:101 NM_001351416:101 NM_001351415:101 ENST00000358883.8:103 AK022808:103 ENST00000374431.7:145 BC036034:145 ENST00000441240.1:-218 AK299279:224 NM_001351414:-230 NM_001351413:-230 NM_001351412:-230 NM_001351411:-230 NM_001351410:-230 NM_001351409:-230 NM_001351408:-230 NM_001351407:-230 NM_001351406:-230 AK298590:-461 NM_001351400:-500 NM_001351401:-500 NM_001351402:-500 NM_001351404:-500 NM_001351403:-500 NM_001351405:-500 |
TATA-Box annotation
| Distance to TSS: | -127 |
|---|---|
| Nearest PromoterID: | NM_001351416 |
| Entrez ID: | 1902 |
| Nearest Unigene: | Hs.126667 |
| Nearest Refseq: | NM_001401 |
| Nearest Ensembl: | ENSG00000198121 |
| Gene Name: | lysophosphatidic acid receptor 1 |
| Gene Alias: | EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1 |
| Gene Description: | lysophosphatidic acid receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
