Difference between revisions of "TSS:Hg 102035.1"
From referenceTSS
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|transcript_name=NM_001378211 NR_109816 BC144680 AK057341 BC112357 | |transcript_name=NM_001378211 NR_109816 BC144680 AK057341 BC112357 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_102035.1 | |tss_id=hg_102035.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:16, 12 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111794938 |
|---|---|
| End of the center position in the TSS region: | 111794939 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001378211 NR_109816 BC144680 AK057341 BC112357 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | NM_001378211:0 NR_109816:0 BC144680:0 AK057341:0 BC112357:0 ENST00000374283.5:-58 LP896555:-58 LP895630:-303 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NR_109816 |
| Entrez ID: | 158401 |
| Nearest Unigene: | Hs.428209 |
| Nearest Refseq: | NM_173521 |
| Nearest Ensembl: | ENSG00000165181 |
| Gene Name: | shortage in chiasmata 1 |
| Gene Alias: | C9orf84|ZIP2|ZIP2H |
| Gene Description: | shortage in chiasmata 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
