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Difference between revisions of "TSS:Hg 102101.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|C9orf158=
 
|C9orf158=
|all_trans=AK315401:0 ENST00000485934.1:2 NM_001371923:-26 NM_001304511:-26 NM_001304509:-26 NM_001304510:-26 ENST00000374180.3:-39 NM_031219:327
+
|all_trans=HGNC:28171
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 23: Line 23:
 
|nearest_refseq=NM_031219
 
|nearest_refseq=NM_031219
 
|nearest_unigene=Hs.7739
 
|nearest_unigene=Hs.7739
|num_trans=8
+
|num_trans=81932
 
|species=human
 
|species=human
 
|start=113376926
 
|start=113376926

Latest revision as of 18:19, 19 July 2021

Basic information about the TSS


TSS ID:hg_102101.1
Species:human
Chr:chr9
TSS Classification:yes
Start:113376926
End:113376960
Strand:-
TSS Score:1
Start of the center position in the TSS region:113376943
End of the center position in the TSS region:113376944



Gene and protein annotation


Transcript_name:AK315401
Distance:0
GeneID:81932
HGNC/MGI_ID:HGNC:28171
UniProt_ID:
Gene_name:haloacid dehalogenase like hydrolase domain containing 3
Gene_symbol:HDHD3
Gene_synonyms:MGC12904
Gene_source:HGNC:28171



Transcript annotation


Transcript_name:AK315401
Distance:0
Num_trans:81932
All_trans:HGNC:28171



TATA-Box annotation


Distance to TSS:43
Nearest PromoterID:NM_001304509
Entrez ID:81932
Nearest Unigene:Hs.7739
Nearest Refseq:NM_031219
Nearest Ensembl:ENSG00000119431
Gene Name:haloacid dehalogenase like hydrolase domain containing 3
Gene Alias:2810435D12Rik|C9orf158
Gene Description:haloacid dehalogenase like hydrolase domain containing 3
Gene Type:protein-coding
CpG%:0.11
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):