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Difference between revisions of "TSS:Hg 102366.1"

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Line 3: Line 3:
 
|GLYT2=
 
|GLYT2=
 
|a1/3GTP=
 
|a1/3GTP=
|all_trans=BC045756:146 ENST00000481799.6:167 NR_168459:167 NR_168460:167 NR_168461:167 NM_001382584:167 NM_001382585:167 NM_001382586:167 ENST00000373793.3:195 ENST00000481534.5:254 ENST00000495328.5:254 AF378121:254 AF378123:254 AF378122:254
+
|all_trans=HGNC:4253
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 25: Line 25:
 
|nearest_refseq=NR_003191
 
|nearest_refseq=NR_003191
 
|nearest_unigene=Hs.97469
 
|nearest_unigene=Hs.97469
|num_trans=14
+
|num_trans=2681
 
|species=human
 
|species=human
 
|start=121500010
 
|start=121500010

Latest revision as of 18:25, 19 July 2021

Basic information about the TSS


TSS ID:hg_102366.1
Species:human
Chr:chr9
TSS Classification:yes
Start:121500010
End:121500017
Strand:-
TSS Score:1
Start of the center position in the TSS region:121500013
End of the center position in the TSS region:121500014



Gene and protein annotation


Transcript_name:BC045756
Distance:146
GeneID:2681
HGNC/MGI_ID:HGNC:4253
UniProt_ID:
Gene_name:glycoprotein alpha-galactosyltransferase 1 (inactive)
Gene_symbol:GGTA1
Gene_synonyms:
Gene_source:HGNC:4253



Transcript annotation


Transcript_name:BC045756
Distance:146
Num_trans:2681
All_trans:HGNC:4253



TATA-Box annotation


Distance to TSS:13
Nearest PromoterID:NR_003191
Entrez ID:2681
Nearest Unigene:Hs.97469
Nearest Refseq:NR_003191
Nearest Ensembl:ENSG00000204136
Gene Name:glycoprotein alpha-galactosyltransferase 1 (inactive)
Gene Alias:GGTA|GGTA1|GLYT2|a1/3GTP
Gene Description:glycoprotein alpha-galactosyltransferase 1, pseudogene
Gene Type:pseudo
CpG%:0.06
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):