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Difference between revisions of "TSS:Hg 102657.1"

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Line 3: Line 3:
 
|GBF1=
 
|GBF1=
 
|PGES2=
 
|PGES2=
|all_trans=BC009397:-117 ENST00000485510.5:-131 BC009456:-135 ENST00000496594.5:-137 KJ905547:-138 DQ891904:-138 DQ895090:-138 AB463194:-138 AM392565:-138 ENST00000476655.6:-141 ENST00000676562.1:-144 ENST00000449878.1:-144 AK223520:-144 ENST00000677651.1:-145 ENST00000677980.1:-146 ENST00000338961.11:-149 ENST00000679345.1:-149 NM_025072:-149 AK024100:-149 ENST00000678174.1:-152 ENST00000497109.6:-152 ENST00000474124.6:-152 ENST00000678916.1:-155 ENST00000483625.6:-155 BC011613:-317 ENST00000493205.6:396
+
|all_trans=HGNC:17822
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 26: Line 26:
 
|nearest_refseq=NM_025072
 
|nearest_refseq=NM_025072
 
|nearest_unigene=Hs.495219
 
|nearest_unigene=Hs.495219
|num_trans=26
+
|num_trans=80142
 
|species=human
 
|species=human
 
|start=128127571
 
|start=128127571

Latest revision as of 18:32, 19 July 2021

Basic information about the TSS


TSS ID:hg_102657.1
Species:human
Chr:chr9
TSS Classification:yes
Start:128127571
End:128127580
Strand:-
TSS Score:1
Start of the center position in the TSS region:128127575
End of the center position in the TSS region:128127576



Gene and protein annotation


Transcript_name:BC009397
Distance:-117
GeneID:80142
HGNC/MGI_ID:HGNC:17822
UniProt_ID:
Gene_name:prostaglandin E synthase 2
Gene_symbol:PTGES2
Gene_synonyms:FLJ14038
Gene_source:HGNC:17822



Transcript annotation


Transcript_name:BC009397
Distance:-117
Num_trans:80142
All_trans:HGNC:17822



TATA-Box annotation


Distance to TSS:153
Nearest PromoterID:NM_025072
Entrez ID:80142
Nearest Unigene:Hs.495219
Nearest Refseq:NM_025072
Nearest Ensembl:ENSG00000148334
Gene Name:prostaglandin E synthase 2
Gene Alias:C9orf15|GBF-1|GBF1|PGES2|mPGES-2
Gene Description:prostaglandin E synthase 2
Gene Type:protein-coding
CpG%:0.105
GC%:0.78607
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):