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Difference between revisions of "TSS:Hg 102974.1"

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Line 3: Line 3:
 
|GTB=
 
|GTB=
 
|NAGAT=
 
|NAGAT=
|all_trans=AK124587:-151 U15197:-343 S44054:-354
+
|all_trans=HGNC:79
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 25: Line 25:
 
|nearest_refseq=NM_020469
 
|nearest_refseq=NM_020469
 
|nearest_unigene=Hs.654423
 
|nearest_unigene=Hs.654423
|num_trans=3
+
|num_trans=28
 
|species=human
 
|species=human
 
|start=133255274
 
|start=133255274

Latest revision as of 18:38, 19 July 2021

Basic information about the TSS


TSS ID:hg_102974.1
Species:human
Chr:chr9
TSS Classification:yes
Start:133255274
End:133255338
Strand:-
TSS Score:1
Start of the center position in the TSS region:133255306
End of the center position in the TSS region:133255307



Gene and protein annotation


Transcript_name:AK124587
Distance:-151
GeneID:28
HGNC/MGI_ID:HGNC:79
UniProt_ID:
Gene_name:ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase
Gene_symbol:ABO
Gene_synonyms:A3GALNT A3GALT1
Gene_source:HGNC:79



Transcript annotation


Transcript_name:AK124587
Distance:-151
Num_trans:28
All_trans:HGNC:79



TATA-Box annotation


Distance to TSS:19895
Nearest PromoterID:NM_020469
Entrez ID:28
Nearest Unigene:Hs.654423
Nearest Refseq:NM_020469
Nearest Ensembl:ENSG00000175164
Gene Name:ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase
Gene Alias:A3GALNT|A3GALT1|GTB|NAGAT
Gene Description:ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase
Gene Type:protein-coding
CpG%:0.035
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):