Personal tools

Difference between revisions of "TSS:Hg 103193.1"

From referenceTSS

Jump to: navigation, search
 
Line 4: Line 4:
 
|LPAAB=
 
|LPAAB=
 
|LPAAT-beta=
 
|LPAAT-beta=
|all_trans=ENST00000371696.7:0 NM_001012727:0 NM_006412:0 LF383683:0 MA619260:0 AF000237:2 AF011374:8 BC000026:23 HM005456:26 ENST00000371694.7:27 ENST00000538402.1:29 U56418:29 BC019292:31 BC004529:32 ENST00000470861.1:60 DQ892146:66 DQ895342:66 KJ906048:67 KJ898240:67 KJ902127:67 KR710265:67
+
|all_trans=HGNC:325
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.155
 
|cpg_percent=0.155
Line 26: Line 26:
 
|nearest_refseq=NM_006412
 
|nearest_refseq=NM_006412
 
|nearest_unigene=Hs.320151
 
|nearest_unigene=Hs.320151
|num_trans=21
+
|num_trans=10555
 
|species=human
 
|species=human
 
|start=136687424
 
|start=136687424
 
|start_of_center_position=136687453
 
|start_of_center_position=136687453
 
|strand=-
 
|strand=-
|transcript_name=ENST00000371696.7 NM_001012727 NM_006412 LF383683 MA619260
+
|transcript_name=ENST00000371696.7
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_103193.1
 
|tss_id=hg_103193.1

Latest revision as of 18:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_103193.1
Species:human
Chr:chr9
TSS Classification:yes
Start:136687424
End:136687483
Strand:-
TSS Score:1
Start of the center position in the TSS region:136687453
End of the center position in the TSS region:136687454



Gene and protein annotation


Transcript_name:ENST00000371696.7
Distance:0
GeneID:10555
HGNC/MGI_ID:HGNC:325
UniProt_ID:A0A024R8I7 O15120
Gene_name:1-acylglycerol-3-phosphate O-acyltransferase 2
Gene_symbol:AGPAT2
Gene_synonyms:LPAAT-beta
Gene_source:HGNC:325



Transcript annotation


Transcript_name:ENST00000371696.7
Distance:0
Num_trans:10555
All_trans:HGNC:325



TATA-Box annotation


Distance to TSS:3
Nearest PromoterID:NM_001012727
Entrez ID:10555
Nearest Unigene:Hs.320151
Nearest Refseq:NM_006412
Nearest Ensembl:ENSG00000169692
Gene Name:1-acylglycerol-3-phosphate O-acyltransferase 2
Gene Alias:1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta
Gene Description:1-acylglycerol-3-phosphate O-acyltransferase 2
Gene Type:protein-coding
CpG%:0.155
GC%:0.80597
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):