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Difference between revisions of "TSS:Hg 103204.1"

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{{TSSDetail
 
{{TSSDetail
 
|LCN5=
 
|LCN5=
|all_trans=ENST00000482893.1:-20 AK090647:-20 ENST00000479767.1:49 BC024235:49 GQ891310:-412 HQ258567:-414 KJ895524:-414 ENST00000480597.5:451
+
|all_trans=HGNC:27038
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.065
 
|cpg_percent=0.065
Line 23: Line 23:
 
|nearest_refseq=NM_178469
 
|nearest_refseq=NM_178469
 
|nearest_unigene=Hs.323991
 
|nearest_unigene=Hs.323991
|num_trans=8
+
|num_trans=138307
 
|species=human
 
|species=human
 
|start=136757505
 
|start=136757505

Latest revision as of 18:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_103204.1
Species:human
Chr:chr9
TSS Classification:yes
Start:136757505
End:136757518
Strand:-
TSS Score:1
Start of the center position in the TSS region:136757511
End of the center position in the TSS region:136757512



Gene and protein annotation


Transcript_name:ENST00000482893.1 AK090647
Distance:-20
GeneID:138307
HGNC/MGI_ID:HGNC:27038
UniProt_ID:Q8NBE9
Gene_name:lipocalin 8
Gene_symbol:LCN8
Gene_synonyms:
Gene_source:HGNC:27038



Transcript annotation


Transcript_name:ENST00000482893.1 AK090647
Distance:-20
Num_trans:138307
All_trans:HGNC:27038



TATA-Box annotation


Distance to TSS:767
Nearest PromoterID:NM_178469
Entrez ID:138307
Nearest Unigene:Hs.323991
Nearest Refseq:NM_178469
Nearest Ensembl:ENSG00000204001
Gene Name:lipocalin 8
Gene Alias:EP17|LCN5
Gene Description:lipocalin 8
Gene Type:protein-coding
CpG%:0.065
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):