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Difference between revisions of "TSS:Hg 103240.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000443788.1:-168 ENST00000480818.3:200 AK026081:-252 ENST00000491246.4:-254 BC014297:-255 AK315738:-263 JF432249:272 AB463628:272 CU676959:272 BC014130:-284 LF346330:-316 MA581907:-316 ENST00000428398.5:-321 ENST00000483559.5:-322 BC035355:-322 ENST00000459905.5:-330 BC031100:-330 LF346331:369 MA581908:369 ENST00000325285.8:-372 NM_018998:-372 LF205587:-404 MA441164:-404
+
|all_trans=HGNC:13613
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.15
 
|cpg_percent=0.15
Line 22: Line 22:
 
|nearest_refseq=NM_018998
 
|nearest_refseq=NM_018998
 
|nearest_unigene=Hs.522507
 
|nearest_unigene=Hs.522507
|num_trans=23
+
|num_trans=54461
 
|species=human
 
|species=human
 
|start=136944354
 
|start=136944354

Latest revision as of 18:44, 19 July 2021

Basic information about the TSS


TSS ID:hg_103240.1
Species:human
Chr:chr9
TSS Classification:yes
Start:136944354
End:136944366
Strand:-
TSS Score:1
Start of the center position in the TSS region:136944360
End of the center position in the TSS region:136944361



Gene and protein annotation


Transcript_name:ENST00000443788.1
Distance:-168
GeneID:54461
HGNC/MGI_ID:HGNC:13613
UniProt_ID:A0A0A0MSK7
Gene_name:F-box and WD repeat domain containing 5
Gene_symbol:FBXW5
Gene_synonyms:DKFZP434B205 Fbw5 MGC20962
Gene_source:HGNC:13613



Transcript annotation


Transcript_name:ENST00000443788.1
Distance:-168
Num_trans:54461
All_trans:HGNC:13613



TATA-Box annotation


Distance to TSS:378
Nearest PromoterID:NM_018998
Entrez ID:54461
Nearest Unigene:Hs.522507
Nearest Refseq:NM_018998
Nearest Ensembl:ENSG00000159069
Gene Name:F-box and WD repeat domain containing 5
Gene Alias:Fbw5
Gene Description:F-box and WD repeat domain containing 5
Gene Type:protein-coding
CpG%:0.15
GC%:0.830846
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):