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Difference between revisions of "TSS:Hg 103241.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000443788.1:17 AK026081:-50 ENST00000491246.4:-52 BC014297:-53 AK315738:-61 BC014130:-82 LF346330:-114 MA581907:-114 ENST00000428398.5:-119 ENST00000483559.5:-120 BC035355:-120 ENST00000459905.5:-128 BC031100:-128 ENST00000325285.8:-170 NM_018998:-170 LF205587:-202 MA441164:-202 ENST00000480818.3:396 JF432249:468 AB463628:468 CU676959:468
+
|all_trans=HGNC:13613
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.16
 
|cpg_percent=0.16
Line 22: Line 22:
 
|nearest_refseq=NM_018998
 
|nearest_refseq=NM_018998
 
|nearest_unigene=Hs.522507
 
|nearest_unigene=Hs.522507
|num_trans=21
+
|num_trans=54461
 
|species=human
 
|species=human
 
|start=136944550
 
|start=136944550

Latest revision as of 18:44, 19 July 2021

Basic information about the TSS


TSS ID:hg_103241.1
Species:human
Chr:chr9
TSS Classification:yes
Start:136944550
End:136944568
Strand:-
TSS Score:1
Start of the center position in the TSS region:136944559
End of the center position in the TSS region:136944560



Gene and protein annotation


Transcript_name:ENST00000443788.1
Distance:17
GeneID:54461
HGNC/MGI_ID:HGNC:13613
UniProt_ID:A0A0A0MSK7
Gene_name:F-box and WD repeat domain containing 5
Gene_symbol:FBXW5
Gene_synonyms:DKFZP434B205 Fbw5 MGC20962
Gene_source:HGNC:13613



Transcript annotation


Transcript_name:ENST00000443788.1
Distance:17
Num_trans:54461
All_trans:HGNC:13613



TATA-Box annotation


Distance to TSS:179
Nearest PromoterID:NM_018998
Entrez ID:54461
Nearest Unigene:Hs.522507
Nearest Refseq:NM_018998
Nearest Ensembl:ENSG00000159069
Gene Name:F-box and WD repeat domain containing 5
Gene Alias:Fbw5
Gene Description:F-box and WD repeat domain containing 5
Gene Type:protein-coding
CpG%:0.16
GC%:0.81592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):