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Difference between revisions of "TSS:Hg 10327.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000641446.1:0 ENST00000641437.1:0 ENST00000376486.3:-12 ENST00000376590.9:14 NM_005957:14 AK312907:14 ENST00000418034.1:42 AY046564:42 ENST00000642002.1:-52 BC053509:53 ENST00000641747.1:-404 LF357340:467 MA592917:467
+
|all_trans=HGNC:7436
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 22: Line 22:
 
|nearest_refseq=NM_001286
 
|nearest_refseq=NM_001286
 
|nearest_unigene=Hs.193043
 
|nearest_unigene=Hs.193043
|num_trans=13
+
|num_trans=4524
 
|species=human
 
|species=human
 
|start=11805977
 
|start=11805977

Latest revision as of 18:45, 19 July 2021

Basic information about the TSS


TSS ID:hg_10327.1
Species:human
Chr:chr1
TSS Classification:yes
Start:11805977
End:11806051
Strand:-
TSS Score:1
Start of the center position in the TSS region:11806014
End of the center position in the TSS region:11806015



Gene and protein annotation


Transcript_name:ENST00000641446.1 ENST00000641437.1
Distance:0
GeneID:4524
HGNC/MGI_ID:HGNC:7436
UniProt_ID:A0A286YF17
Gene_name:methylenetetrahydrofolate reductase
Gene_symbol:MTHFR
Gene_synonyms:
Gene_source:HGNC:7436



Transcript annotation


Transcript_name:ENST00000641446.1 ENST00000641437.1
Distance:0
Num_trans:4524
All_trans:HGNC:7436



TATA-Box annotation


Distance to TSS:-82
Nearest PromoterID:NM_001256959
Entrez ID:1185
Nearest Unigene:Hs.193043
Nearest Refseq:NM_001286
Nearest Ensembl:ENSG00000011021
Gene Name:methylenetetrahydrofolate reductase
Gene Alias:CLC-6
Gene Description:chloride voltage-gated channel 6
Gene Type:protein-coding
CpG%:0.115
GC%:0.711443
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):