Difference between revisions of "TSS:Hg 103623.1"
From referenceTSS
| Line 36: | Line 36: | ||
|tata_box=-94(GACCATATAAGA,-,0.00) | |tata_box=-94(GACCATATAAGA,-,0.00) | ||
|transcript_name=LP747418 MB486558 BC001479 D17793 | |transcript_name=LP747418 MB486558 BC001479 D17793 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_103623.1 | |tss_id=hg_103623.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:49, 12 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5094383 |
|---|---|
| End of the center position in the TSS region: | 5094384 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LP747418 MB486558 BC001479 D17793 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29 |
| All_trans: | LP747418:0 MB486558:0 BC001479:0 D17793:0 AB018580:7 ENST00000480697.6:15 ENST00000380554.5:15 NM_003739:15 NM_001253909:15 AK296701:15 AK315411:17 AK290365:17 ENST00000605322.1:19 AK310940:19 BC019230:23 S68288:36 AF149416:40 CU674730:46 CU676394:46 AM392923:46 KJ892585:46 KJ897885:46 KR710495:46 DQ893860:46 GQ129450:46 GQ129451:46 AB383754:46 BT007286:46 DQ890679:46 |
TATA-Box annotation
| Distance to TSS: | -31 |
|---|---|
| Nearest PromoterID: | NM_003739 |
| Entrez ID: | 8644 |
| Nearest Unigene: | Hs.78183 |
| Nearest Refseq: | NM_003739 |
| Nearest Ensembl: | ENSG00000196139 |
| Gene Name: | aldo-keto reductase family 1 member C3 |
| Gene Alias: | DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS |
| Gene Description: | aldo-keto reductase family 1 member C3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -94(GACCATATAAGA,-,0.00) |
