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Difference between revisions of "TSS:Hg 103640.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|NET1A=
 
|NET1A=
|all_trans=GQ891307:-17 CU690984:-18 KJ892985:-18 AB587387:-20 S82401:-24 AB209852:-105 BC053553:-111 AK299335:-115 ENST00000355029.9:-153 NM_001047160:-153
+
|all_trans=HGNC:14592
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 23: Line 23:
 
|nearest_refseq=NM_005863
 
|nearest_refseq=NM_005863
 
|nearest_unigene=Hs.25155
 
|nearest_unigene=Hs.25155
|num_trans=10
+
|num_trans=10276
 
|species=human
 
|species=human
 
|start=5412709
 
|start=5412709

Latest revision as of 18:52, 19 July 2021

Basic information about the TSS


TSS ID:hg_103640.1
Species:human
Chr:chr10
TSS Classification:yes
Start:5412709
End:5412726
Strand:+
TSS Score:1
Start of the center position in the TSS region:5412717
End of the center position in the TSS region:5412718



Gene and protein annotation


Transcript_name:GQ891307
Distance:-17
GeneID:10276
HGNC/MGI_ID:HGNC:14592
UniProt_ID:
Gene_name:neuroepithelial cell transforming 1
Gene_symbol:NET1
Gene_synonyms:ARHGEF8 NET1A
Gene_source:HGNC:14592



Transcript annotation


Transcript_name:GQ891307
Distance:-17
Num_trans:10276
All_trans:HGNC:14592



TATA-Box annotation


Distance to TSS:161
Nearest PromoterID:NM_001047160
Entrez ID:10276
Nearest Unigene:Hs.25155
Nearest Refseq:NM_005863
Nearest Ensembl:ENSG00000173848
Gene Name:neuroepithelial cell transforming 1
Gene Alias:ARHGEF8|NET1A
Gene Description:neuroepithelial cell transforming 1
Gene Type:protein-coding
CpG%:0.12
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):