Difference between revisions of "TSS:Hg 103828.1"
From referenceTSS
| Line 34: | Line 34: | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_001326323 NM_001326319 NM_001326318 NM_001326317 NM_001326321 NM_001326320 | |transcript_name=NM_001326323 NM_001326319 NM_001326318 NM_001326317 NM_001326321 NM_001326320 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_103828.1 | |tss_id=hg_103828.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=O95319 | |uniprot_id=O95319 | ||
}} | }} | ||
Revision as of 18:53, 12 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 10462506 |
|---|---|
| End of the center position in the TSS region: | 10462507 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001326323 NM_001326319 NM_001326318 NM_001326317 NM_001326321 NM_001326320 |
|---|---|
| Distance: | 38 |
| Num_trans: | 6 |
| All_trans: | NM_001326323:38 NM_001326319:38 NM_001326318:38 NM_001326317:38 NM_001326321:38 NM_001326320:38 |
TATA-Box annotation
| Distance to TSS: | -43 |
|---|---|
| Nearest PromoterID: | NM_001326318 |
| Entrez ID: | 10659 |
| Nearest Unigene: | Hs.309288 |
| Nearest Refseq: | NM_006561 |
| Nearest Ensembl: | ENSG00000048740 |
| Gene Name: | CUGBP Elav-like family member 2 |
| Gene Alias: | BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR |
| Gene Description: | CUGBP Elav-like family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
