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Difference between revisions of "TSS:Hg 103867.1"

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Line 6: Line 6:
 
|ETR3=
 
|ETR3=
 
|NAPOR=
 
|NAPOR=
|all_trans=AK304216:0 ENST00000609870.5:25 ENST00000609692.5:25 AK310038:25 AK302681:25 ENST00000354897.3:27 AK295511:69 AK316354:-175 AF432906:-275 ENST00000608830.5:-313 AK293164:-313 AF036956:-339 AK299992:-356 AK297313:-362 ENST00000399850.7:-423 ENST00000417956.6:-423 NM_001083591:-423 NM_001025076:-423 AK299983:-487
+
|all_trans=HGNC:2550
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.04
 
|cpg_percent=0.04
Line 28: Line 28:
 
|nearest_refseq=NM_006561
 
|nearest_refseq=NM_006561
 
|nearest_unigene=Hs.309288
 
|nearest_unigene=Hs.309288
|num_trans=19
+
|num_trans=10659
 
|species=human
 
|species=human
 
|start=11165452
 
|start=11165452

Latest revision as of 18:57, 19 July 2021

Basic information about the TSS


TSS ID:hg_103867.1
Species:human
Chr:chr10
TSS Classification:yes
Start:11165452
End:11165459
Strand:+
TSS Score:1
Start of the center position in the TSS region:11165455
End of the center position in the TSS region:11165456



Gene and protein annotation


Transcript_name:AK304216
Distance:0
GeneID:10659
HGNC/MGI_ID:HGNC:2550
UniProt_ID:
Gene_name:CUGBP Elav-like family member 2
Gene_symbol:CELF2
Gene_synonyms:BRUNOL3 Etr-3 NAPOR-2
Gene_source:HGNC:2550



Transcript annotation


Transcript_name:AK304216
Distance:0
Num_trans:10659
All_trans:HGNC:2550



TATA-Box annotation


Distance to TSS:426
Nearest PromoterID:NM_001083591
Entrez ID:10659
Nearest Unigene:Hs.309288
Nearest Refseq:NM_006561
Nearest Ensembl:ENSG00000048740
Gene Name:CUGBP Elav-like family member 2
Gene Alias:BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR
Gene Description:CUGBP Elav-like family member 2
Gene Type:protein-coding
CpG%:0.04
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):