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Difference between revisions of "TSS:Hg 103933.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000263036.9:0 AK055403:0 ENST00000378764.6:146
+
|all_trans=HGNC:17142
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 22: Line 22:
 
|nearest_refseq=NM_031455
 
|nearest_refseq=NM_031455
 
|nearest_unigene=Hs.498720
 
|nearest_unigene=Hs.498720
|num_trans=3
+
|num_trans=10133
 
|species=human
 
|species=human
 
|start=13099441
 
|start=13099441

Latest revision as of 18:59, 19 July 2021

Basic information about the TSS


TSS ID:hg_103933.1
Species:human
Chr:chr10
TSS Classification:yes
Start:13099441
End:13099457
Strand:+
TSS Score:1
Start of the center position in the TSS region:13099449
End of the center position in the TSS region:13099450



Gene and protein annotation


Transcript_name:ENST00000263036.9 AK055403
Distance:0
GeneID:10133
HGNC/MGI_ID:HGNC:17142
UniProt_ID:Q96CV9
Gene_name:optineurin
Gene_symbol:OPTN
Gene_synonyms:FIP-2 FIP2 HIP7 HYPL NRP TFIIIA-INTP
Gene_source:HGNC:17142



Transcript annotation


Transcript_name:ENST00000263036.9 AK055403
Distance:0
Num_trans:10133
All_trans:HGNC:17142



TATA-Box annotation


Distance to TSS:540
Nearest PromoterID:NM_001282658
Entrez ID:83643
Nearest Unigene:Hs.498720
Nearest Refseq:NM_031455
Nearest Ensembl:ENSG00000151468
Gene Name:optineurin
Gene Alias:-
Gene Description:coiled-coil domain containing 3
Gene Type:protein-coding
CpG%:0.03
GC%:0.631841
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):