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Difference between revisions of "TSS:Hg 103950.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000417658.5:11 ENST00000378572.8:37 NM_003675:37 AK314814:37 ENST00000320054.4:40 BC002572:78 U51990:87 BC000794:89 KJ897869:159
+
|all_trans=HGNC:17351
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 23: Line 23:
 
|nearest_refseq=NM_003675
 
|nearest_refseq=NM_003675
 
|nearest_unigene=Hs.660649
 
|nearest_unigene=Hs.660649
|num_trans=9
+
|num_trans=8559
 
|species=human
 
|species=human
 
|start=13586921
 
|start=13586921

Latest revision as of 18:59, 19 July 2021

Basic information about the TSS


TSS ID:hg_103950.1
Species:human
Chr:chr10
TSS Classification:yes
Start:13586921
End:13586928
Strand:+
TSS Score:1
Start of the center position in the TSS region:13586924
End of the center position in the TSS region:13586925



Gene and protein annotation


Transcript_name:ENST00000417658.5
Distance:11
GeneID:8559
HGNC/MGI_ID:HGNC:17351
UniProt_ID:Q5T9P7
Gene_name:pre-mRNA processing factor 18
Gene_symbol:PRPF18
Gene_synonyms:hPrp18
Gene_source:HGNC:17351



Transcript annotation


Transcript_name:ENST00000417658.5
Distance:11
Num_trans:8559
All_trans:HGNC:17351



TATA-Box annotation


Distance to TSS:-40
Nearest PromoterID:NM_003675
Entrez ID:8559
Nearest Unigene:Hs.660649
Nearest Refseq:NM_003675
Nearest Ensembl:ENSG00000165630
Gene Name:pre-mRNA processing factor 18
Gene Alias:PRP18|hPrp18
Gene Description:pre-mRNA processing factor 18
Gene Type:protein-coding
CpG%:0.08
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):