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Difference between revisions of "TSS:Hg 104173.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC012885:-103 AF378757:125 CU680430:131 KJ903482:131 AY358486:-497
+
|all_trans=HGNC:21013
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 22: Line 22:
 
|nearest_refseq=NM_032812
 
|nearest_refseq=NM_032812
 
|nearest_unigene=Hs.99472
 
|nearest_unigene=Hs.99472
|num_trans=5
+
|num_trans=84898
 
|species=human
 
|species=human
 
|start=19816939
 
|start=19816939

Latest revision as of 19:04, 19 July 2021

Basic information about the TSS


TSS ID:hg_104173.1
Species:human
Chr:chr10
TSS Classification:yes
Start:19816939
End:19816946
Strand:+
TSS Score:1
Start of the center position in the TSS region:19816942
End of the center position in the TSS region:19816943



Gene and protein annotation


Transcript_name:BC012885
Distance:-103
GeneID:84898
HGNC/MGI_ID:HGNC:21013
UniProt_ID:
Gene_name:plexin domain containing 2
Gene_symbol:PLXDC2
Gene_synonyms:FLJ14623 TEM7R
Gene_source:HGNC:21013



Transcript annotation


Transcript_name:BC012885
Distance:-103
Num_trans:84898
All_trans:HGNC:21013



TATA-Box annotation


Distance to TSS:511
Nearest PromoterID:NM_001282736
Entrez ID:84898
Nearest Unigene:Hs.99472
Nearest Refseq:NM_032812
Nearest Ensembl:ENSG00000120594
Gene Name:plexin domain containing 2
Gene Alias:TEM7R
Gene Description:plexin domain containing 2
Gene Type:protein-coding
CpG%:0.105
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):