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Difference between revisions of "TSS:Hg 104380.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000656265.1:0 ENST00000628907.2:0 ENST00000655478.1:0 ENST00000669089.1:0 ENST00000655020.1:0 ENST00000663043.1:0 ENST00000648557.1:0 ENST00000668934.1:0 ENST00000658893.1:0 ENST00000625325.2:0 ENST00000662090.1:0 ENST00000655854.1:0 ENST00000628620.1:4 ENST00000671596.1:-11 ENST00000626230.2:-18 NR_108069:-18 NR_108067:-18 NR_108068:-18 AK123440:-18
+
|all_trans=HGNC:44915
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NR_108067
 
|nearest_refseq=NR_108067
 
|nearest_unigene=Hs.128298
 
|nearest_unigene=Hs.128298
|num_trans=19
+
|num_trans=101929052
 
|species=human
 
|species=human
 
|start=25651729
 
|start=25651729

Latest revision as of 19:08, 19 July 2021

Basic information about the TSS


TSS ID:hg_104380.1
Species:human
Chr:chr10
TSS Classification:no
Start:25651729
End:25651771
Strand:+
TSS Score:1
Start of the center position in the TSS region:25651750
End of the center position in the TSS region:25651751



Gene and protein annotation


Transcript_name:ENST00000656265.1 ENST00000628907.2 ENST00000655478.1 ENST00000669089.1 ENST00000655020.1 ENST00000663043.1 ENST00000648557.1 ENST00000668934.1 ENST00000658893.1 ENST00000625325.2 ENST00000662090.1 ENST00000655854.1
Distance:0
GeneID:101929052
HGNC/MGI_ID:HGNC:44915
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 836
Gene_symbol:LINC00836
Gene_synonyms:
Gene_source:HGNC:44915



Transcript annotation


Transcript_name:ENST00000656265.1 ENST00000628907.2 ENST00000655478.1 ENST00000669089.1 ENST00000655020.1 ENST00000663043.1 ENST00000648557.1 ENST00000668934.1 ENST00000658893.1 ENST00000625325.2 ENST00000662090.1 ENST00000655854.1
Distance:0
Num_trans:101929052
All_trans:HGNC:44915



TATA-Box annotation


Distance to TSS:38
Nearest PromoterID:NR_108068
Entrez ID:101929052
Nearest Unigene:Hs.128298
Nearest Refseq:NR_108067
Nearest Ensembl:ENSG00000280809
Gene Name:long intergenic non-protein coding RNA 836
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 836
Gene Type:ncRNA
CpG%:0.01
GC%:0.373134
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-26(GCTTTTATGCTG,+,0.00)