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Difference between revisions of "TSS:Hg 105260.1"

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{{TSSDetail
 
{{TSSDetail
−
|all_trans=ENST00000538031.5:0 ENST00000543719.5:0 ENST00000541012.5:0 ENST00000543229.5:0 ENST00000539539.5:0 ENST00000265872.11:0 ENST00000543225.5:0 ENST00000536012.5:0 ENST00000494903.2:0 NR_104262:0 NM_001282960:0 NM_001282959:0 NM_018237:0 AK023438:0 AF465616:0 AK307550:0 AK298004:0 BC058846:0 AK001701:0 AY249140:0 AK292649:0 AK307704:0 AK122871:0 AK299307:0 AK307671:0 BX647943:0 ENST00000540210.5:2 BC130626:2 BC132725:2 BC144118:2 BC108682:13 ENST00000630771.2:-63 ENST00000536391.5:-195
+
|all_trans=HGNC:24236
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 22: Line 22:
 
|nearest_refseq=NM_018237
 
|nearest_refseq=NM_018237
 
|nearest_unigene=Hs.49853
 
|nearest_unigene=Hs.49853
−
|num_trans=33
+
|num_trans=55749
 
|species=human
 
|species=human
 
|start=68721206
 
|start=68721206
 
|start_of_center_position=68721229
 
|start_of_center_position=68721229
 
|strand=+
 
|strand=+
−
|transcript_name=ENST00000538031.5 ENST00000543719.5 ENST00000541012.5 ENST00000543229.5 ENST00000539539.5 ENST00000265872.11 ENST00000543225.5 ENST00000536012.5 ENST00000494903.2 NR_104262 NM_001282960 NM_001282959 NM_018237 AK023438 AF465616 AK307550 AK298004 BC058846 AK001701 AY249140 AK292649 AK307704 AK122871 AK299307 AK307671 BX647943
+
|transcript_name=ENST00000538031.5 ENST00000543719.5 ENST00000541012.5 ENST00000543229.5 ENST00000539539.5 ENST00000265872.11 ENST00000543225.5 ENST00000536012.5 ENST00000494903.2 AK023438 AF465616 AK307550 AK298004 BC058846 AK001701 AY249140 AK292649 AK307704 AK122871 AK299307 AK307671 BX647943
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_105260.1
 
|tss_id=hg_105260.1

Latest revision as of 19:27, 19 July 2021

Basic information about the TSS

TSS ID:hg_105260.1
Species:human
Chr:chr10
TSS Classification:yes
Start:68721206
End:68721253
Strand:+
TSS Score:1
Start of the center position in the TSS region:68721229
End of the center position in the TSS region:68721230



Gene and protein annotation

Transcript_name:ENST00000538031.5 ENST00000543719.5 ENST00000541012.5 ENST00000543229.5 ENST00000539539.5 ENST00000265872.11 ENST00000543225.5 ENST00000536012.5 ENST00000494903.2 AK023438 AF465616 AK307550 AK298004 BC058846 AK001701 AY249140 AK292649 AK307704 AK122871 AK299307 AK307671 BX647943
Distance:0
GeneID:55749
HGNC/MGI_ID:HGNC:24236
UniProt_ID:A0A0C4DGG8 F5H1H2 F5H1L3 F5H2E6 F5H3E1 F5H7M9 F5H808 Q8IX12
Gene_name:cell division cycle and apoptosis regulator 1
Gene_symbol:CCAR1
Gene_synonyms:CARP-1 CARP1 FLJ10590
Gene_source:HGNC:24236



Transcript annotation

Transcript_name:ENST00000538031.5 ENST00000543719.5 ENST00000541012.5 ENST00000543229.5 ENST00000539539.5 ENST00000265872.11 ENST00000543225.5 ENST00000536012.5 ENST00000494903.2 AK023438 AF465616 AK307550 AK298004 BC058846 AK001701 AY249140 AK292649 AK307704 AK122871 AK299307 AK307671 BX647943
Distance:0
Num_trans:55749
All_trans:HGNC:24236



TATA-Box annotation

Distance to TSS:-9
Nearest PromoterID:NM_018237
Entrez ID:55749
Nearest Unigene:Hs.49853
Nearest Refseq:NM_018237
Nearest Ensembl:ENSG00000060339
Gene Name:cell division cycle and apoptosis regulator 1
Gene Alias:-
Gene Description:cell division cycle and apoptosis regulator 1
Gene Type:protein-coding
CpG%:0.09
GC%:0.646766
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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