Difference between revisions of "TSS:Hg 105325.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PEP8A= | |PEP8A= | ||
|VPS26= | |VPS26= | ||
| − | |all_trans= | + | |all_trans=HGNC:12711 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_004896 | |nearest_refseq=NM_004896 | ||
|nearest_unigene=Hs.499925 | |nearest_unigene=Hs.499925 | ||
| − | |num_trans= | + | |num_trans=9559 |
|species=human | |species=human | ||
|start=69124167 | |start=69124167 | ||
|start_of_center_position=69124204 | |start_of_center_position=69124204 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000263559.11 ENST00000497564.5 ENST00000490696.5 | + | |transcript_name=ENST00000263559.11 ENST00000497564.5 ENST00000490696.5 BC022505 BX649092 AK315496 AK297142 AF054179 AF175266 AK309021 AK022992 BX647725 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105325.1 | |tss_id=hg_105325.1 | ||
Latest revision as of 19:28, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69124204 |
|---|---|
| End of the center position in the TSS region: | 69124205 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000263559.11 ENST00000497564.5 ENST00000490696.5 BC022505 BX649092 AK315496 AK297142 AF054179 AF175266 AK309021 AK022992 BX647725 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9559 |
| All_trans: | HGNC:12711 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_004896 |
| Entrez ID: | 9559 |
| Nearest Unigene: | Hs.499925 |
| Nearest Refseq: | NM_004896 |
| Nearest Ensembl: | ENSG00000122958 |
| Gene Name: | VPS26, retromer complex component A |
| Gene Alias: | HB58|Hbeta58|PEP8A|VPS26 |
| Gene Description: | VPS26, retromer complex component A |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
