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Difference between revisions of "TSS:Hg 10544.1"

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Line 5: Line 5:
 
|NBG=
 
|NBG=
 
|NBPF=
 
|NBPF=
|all_trans=ENST00000430580.6:0 ENST00000432949.5:0 AY894575:0 BC066930:-28 ENST00000449853.2:-41 BC010124:-41 BC082236:-42 BC110431:-53 AK055895:-62 ENST00000599069.5:-69 BC093404:-69 NM_017940:-71 LP895741:-95 AK123260:225
+
|all_trans=HGNC:26088
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 27: Line 27:
 
|nearest_refseq=NM_017940
 
|nearest_refseq=NM_017940
 
|nearest_unigene=Hs.467587
 
|nearest_unigene=Hs.467587
|num_trans=14
+
|num_trans=55672
 
|species=human
 
|species=human
 
|start=16613481
 
|start=16613481

Latest revision as of 19:31, 19 July 2021

Basic information about the TSS


TSS ID:hg_10544.1
Species:human
Chr:chr1
TSS Classification:yes
Start:16613481
End:16613493
Strand:-
TSS Score:1
Start of the center position in the TSS region:16613487
End of the center position in the TSS region:16613488



Gene and protein annotation


Transcript_name:ENST00000430580.6 ENST00000432949.5 AY894575
Distance:0
GeneID:55672
HGNC/MGI_ID:HGNC:26088
UniProt_ID:Q3BBV0 S4R2X0
Gene_name:NBPF member 1
Gene_symbol:NBPF1
Gene_synonyms:FLJ20719 KIAA1693
Gene_source:HGNC:26088



Transcript annotation


Transcript_name:ENST00000430580.6 ENST00000432949.5 AY894575
Distance:0
Num_trans:55672
All_trans:HGNC:26088



TATA-Box annotation


Distance to TSS:118
Nearest PromoterID:NM_017940
Entrez ID:55672
Nearest Unigene:Hs.467587
Nearest Refseq:NM_017940
Nearest Ensembl:ENSG00000219481
Gene Name:NBPF member 1
Gene Alias:AB13|AB14|AB23|AD2|NBG|NBPF
Gene Description:NBPF member 1
Gene Type:protein-coding
CpG%:0.13
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):