Difference between revisions of "TSS:Hg 10561.1"
From referenceTSS
| Line 2: | Line 2: | ||
|MAGP-1= | |MAGP-1= | ||
|MAGP1= | |MAGP1= | ||
| − | |all_trans= | + | |all_trans=HGNC:7033 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_002403 | |nearest_refseq=NM_002403 | ||
|nearest_unigene=Hs.389137 | |nearest_unigene=Hs.389137 | ||
| − | |num_trans= | + | |num_trans=4237 |
|species=human | |species=human | ||
|start=16981081 | |start=16981081 | ||
| Line 30: | Line 30: | ||
|strand=- | |strand=- | ||
|tata_box=-48(CTCTAGAAAAGG,-,0.00) | |tata_box=-48(CTCTAGAAAAGG,-,0.00) | ||
| − | |transcript_name= | + | |transcript_name=BC015039 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10561.1 | |tss_id=hg_10561.1 | ||
Latest revision as of 19:34, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16981106 |
|---|---|
| End of the center position in the TSS region: | 16981107 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC015039 |
|---|---|
| Distance: | 404 |
| Num_trans: | 4237 |
| All_trans: | HGNC:7033 |
TATA-Box annotation
| Distance to TSS: | -429 |
|---|---|
| Nearest PromoterID: | NM_001135248 |
| Entrez ID: | 4237 |
| Nearest Unigene: | Hs.389137 |
| Nearest Refseq: | NM_002403 |
| Nearest Ensembl: | ENSG00000117122 |
| Gene Name: | microfibril associated protein 2 |
| Gene Alias: | MAGP|MAGP-1|MAGP1 |
| Gene Description: | microfibril associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -48(CTCTAGAAAAGG,-,0.00) |
