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Difference between revisions of "TSS:Hg 123314.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000318291.4:-19 BC033133:-19 AK311371:23 ENST00000655409.1:60 ENST00000670735.1:203 ENST00000543884.2:-326 ENST00000662519.1:397
+
|all_trans=HGNC:40405
 
|chr=chr12
 
|chr=chr12
 
|cpg_percent=0.155
 
|cpg_percent=0.155
Line 22: Line 22:
 
|nearest_refseq=NM_016533
 
|nearest_refseq=NM_016533
 
|nearest_unigene=Hs.655804
 
|nearest_unigene=Hs.655804
|num_trans=7
+
|num_trans=100049716
 
|species=human
 
|species=human
 
|start=642999
 
|start=642999

Latest revision as of 02:01, 20 July 2021

Basic information about the TSS


TSS ID:hg_123314.1
Species:human
Chr:chr12
TSS Classification:yes
Start:642999
End:643013
Strand:+
TSS Score:1
Start of the center position in the TSS region:643006
End of the center position in the TSS region:643007



Gene and protein annotation


Transcript_name:ENST00000318291.4 BC033133
Distance:-19
GeneID:100049716
HGNC/MGI_ID:HGNC:40405
UniProt_ID:Q8N503
Gene_name:NINJ2 antisense RNA 1
Gene_symbol:NINJ2-AS1
Gene_synonyms:
Gene_source:HGNC:40405



Transcript annotation


Transcript_name:ENST00000318291.4 BC033133
Distance:-19
Num_trans:100049716
All_trans:HGNC:40405



TATA-Box annotation


Distance to TSS:630
Nearest PromoterID:NM_001294346
Entrez ID:4815
Nearest Unigene:Hs.655804
Nearest Refseq:NM_016533
Nearest Ensembl:ENSG00000171840
Gene Name:NINJ2 antisense RNA 1
Gene Alias:-
Gene Description:ninjurin 2
Gene Type:protein-coding
CpG%:0.155
GC%:0.825871
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):