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Difference between revisions of "TSS:Hg 126316.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC019026:-340 BC039697:-345 BC098453:-347 ENST00000542466.2:-395 BC069024:-395 AK301303:-400 NR_027032:-426
+
|all_trans=HGNC:48633
 
|chr=chr12
 
|chr=chr12
 
|cpg_percent=0.14
 
|cpg_percent=0.14
Line 22: Line 22:
 
|nearest_refseq=NR_027032
 
|nearest_refseq=NR_027032
 
|nearest_unigene=Hs.656080
 
|nearest_unigene=Hs.656080
|num_trans=7
+
|num_trans=100130776
 
|species=human
 
|species=human
 
|start=57726665
 
|start=57726665

Latest revision as of 03:06, 20 July 2021

Basic information about the TSS


TSS ID:hg_126316.1
Species:human
Chr:chr12
TSS Classification:yes
Start:57726665
End:57726694
Strand:+
TSS Score:1
Start of the center position in the TSS region:57726679
End of the center position in the TSS region:57726680



Gene and protein annotation


Transcript_name:BC019026
Distance:-340
GeneID:100130776
HGNC/MGI_ID:HGNC:48633
UniProt_ID:
Gene_name:AGAP2 antisense RNA 1
Gene_symbol:AGAP2-AS1
Gene_synonyms:LOC100130776 PUNISHER
Gene_source:HGNC:48633



Transcript annotation


Transcript_name:BC019026
Distance:-340
Num_trans:100130776
All_trans:HGNC:48633



TATA-Box annotation


Distance to TSS:440
Nearest PromoterID:NR_027032
Entrez ID:100130776
Nearest Unigene:Hs.656080
Nearest Refseq:NR_027032
Nearest Ensembl:ENSG00000255737
Gene Name:AGAP2 antisense RNA 1
Gene Alias:PUNISHER
Gene Description:AGAP2 antisense RNA 1
Gene Type:ncRNA
CpG%:0.14
GC%:0.781095
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):