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Difference between revisions of "TSS:Hg 136493.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000471771.5:-1 ENST00000461838.5:-91 ENST00000485959.5:-103 ENST00000493719.5:-124 BC039599:-148 NM_001166262:-149 ENST00000460973.5:-156 NM_001166261:-157 LF384075:-157 MA619652:-157 ENST00000464753.1:-159 DQ575760:-255
+
|all_trans=HGNC:29788
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 22: Line 22:
 
|nearest_refseq=NM_152912
 
|nearest_refseq=NM_152912
 
|nearest_unigene=Hs.534582
 
|nearest_unigene=Hs.534582
|num_trans=12
+
|num_trans=219402
 
|species=human
 
|species=human
 
|start=27450029
 
|start=27450029

Latest revision as of 06:46, 20 July 2021

Basic information about the TSS


TSS ID:hg_136493.1
Species:human
Chr:chr13
TSS Classification:yes
Start:27450029
End:27450040
Strand:-
TSS Score:1
Start of the center position in the TSS region:27450034
End of the center position in the TSS region:27450035



Gene and protein annotation


Transcript_name:ENST00000471771.5
Distance:-1
GeneID:219402
HGNC/MGI_ID:HGNC:29788
UniProt_ID:
Gene_name:mitochondrial translational initiation factor 3
Gene_symbol:MTIF3
Gene_synonyms:IF-3mt IF3(mt)
Gene_source:HGNC:29788



Transcript annotation


Transcript_name:ENST00000471771.5
Distance:-1
Num_trans:219402
All_trans:HGNC:29788



TATA-Box annotation


Distance to TSS:154
Nearest PromoterID:NM_001166262
Entrez ID:219402
Nearest Unigene:Hs.534582
Nearest Refseq:NM_152912
Nearest Ensembl:ENSG00000122033
Gene Name:mitochondrial translational initiation factor 3
Gene Alias:IF3mt
Gene Description:mitochondrial translational initiation factor 3
Gene Type:protein-coding
CpG%:0.075
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):