Difference between revisions of "TSS:Hg 179107.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000480726.1:29 uc060tgi.1:29 |chr=chr19 |cpg_percent=0.02 |distance=29 |distance_to_tss=3909 |end=10305657 |entrez_id=100125288 |gc_percent=0.6169...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GLP-1= | ||
| + | |GLP1= | ||
|all_trans=ENST00000480726.1:29 uc060tgi.1:29 | |all_trans=ENST00000480726.1:29 uc060tgi.1:29 | ||
|chr=chr19 | |chr=chr19 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=3909 | |distance_to_tss=3909 | ||
|end=10305657 | |end=10305657 | ||
| + | |end_of_center_position=10305649 | ||
|entrez_id=100125288 | |entrez_id=100125288 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=GATAD3 | + | |gene_alias=GATAD3 |
|gene_description="zinc finger, GATA-like protein 1" | |gene_description="zinc finger, GATA-like protein 1" | ||
|gene_id=100125288 | |gene_id=100125288 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=10305639 | |start=10305639 | ||
| + | |start_of_center_position=10305648 | ||
|strand=- | |strand=- | ||
|tata_box="-100(CCATTTAGAGCC,+,0.00)" | |tata_box="-100(CCATTTAGAGCC,+,0.00)" | ||
Revision as of 15:58, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 10305648 |
|---|---|
| End of the center position in the TSS region: | 10305649 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000480726.1 uc060tgi.1 |
|---|---|
| Distance: | 29 |
| Num_trans: | 2 |
| All_trans: | ENST00000480726.1:29 uc060tgi.1:29 |
TATA-Box annotation
| Distance to TSS: | 3909 |
|---|---|
| Nearest PromoterID: | NM_001103167 |
| Entrez ID: | 100125288 |
| Nearest Unigene: | Hs.709296 |
| Nearest Refseq: | NM_001103167 |
| Nearest Ensembl: | ENSG00000220201 |
| Gene Name: | "zinc finger, GATA-like protein 1" |
| Gene Alias: | GATAD3 |
| Gene Description: | "zinc finger, GATA-like protein 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-100(CCATTTAGAGCC,+,0.00)" |
