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Difference between revisions of "TSS:Hg 145559.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000557171.1:-20 ENST00000654579.1:-36 ENST00000383019.2:-93 NR_040082:-93 AK124933:-93 ENST00000669487.1:-102 ENST00000659855.1:-172 ENST00000659702.1:-334
+
|all_trans=HGNC:53268
 
|chr=chr15
 
|chr=chr15
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 22: Line 22:
 
|nearest_refseq=NR_040082
 
|nearest_refseq=NR_040082
 
|nearest_unigene=Hs.587854
 
|nearest_unigene=Hs.587854
|num_trans=8
+
|num_trans=100128714
 
|species=human
 
|species=human
 
|start=25902452
 
|start=25902452

Latest revision as of 10:04, 20 July 2021

Basic information about the TSS


TSS ID:hg_145559.1
Species:human
Chr:chr15
TSS Classification:no
Start:25902452
End:25902490
Strand:+
TSS Score:1
Start of the center position in the TSS region:25902471
End of the center position in the TSS region:25902472



Gene and protein annotation


Transcript_name:ENST00000557171.1
Distance:-20
GeneID:100128714
HGNC/MGI_ID:HGNC:53268
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 2346
Gene_symbol:LINC02346
Gene_synonyms:
Gene_source:HGNC:53268



Transcript annotation


Transcript_name:ENST00000557171.1
Distance:-20
Num_trans:100128714
All_trans:HGNC:53268



TATA-Box annotation


Distance to TSS:111
Nearest PromoterID:NR_040082
Entrez ID:100128714
Nearest Unigene:Hs.587854
Nearest Refseq:NR_040082
Nearest Ensembl:ENSG00000206187
Gene Name:long intergenic non-protein coding RNA 2346
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 2346
Gene Type:ncRNA
CpG%:0.03
GC%:0.587065
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):