Difference between revisions of "TSS:Hg 100795.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=-11 |entrez_id=642236 |gc_percent=0.631841 |gene_alias=- |gene_description="FSHD region gene 1 family member J, pseudogene" |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000376334.3:0 NR_033907:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=0 | ||
|distance_to_tss=-11 | |distance_to_tss=-11 | ||
| + | |end=63859661 | ||
|entrez_id=642236 | |entrez_id=642236 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description="FSHD region gene 1 family member J, pseudogene" | |gene_description="FSHD region gene 1 family member J, pseudogene" | ||
| − | |gene_name=FRG1JP | + | |gene_id=642236 |
| + | |gene_name="FSHD region gene 1 family member J, pseudogene" | ||
| + | |gene_source=HGNC:51768 | ||
| + | |gene_symbol=FRG1JP | ||
| + | |gene_synonyms= | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:51768 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_033907 | |nearest_promoter_id=NR_033907 | ||
|nearest_refseq=NR_033907 | |nearest_refseq=NR_033907 | ||
|nearest_unigene=Hs.650100 | |nearest_unigene=Hs.650100 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=63859628 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376334.3 NR_033907 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100795.1 | |tss_id=hg_100795.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:15, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376334.3 NR_033907 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000376334.3:0 NR_033907:0 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NR_033907 |
| Entrez ID: | 642236 |
| Nearest Unigene: | Hs.650100 |
| Nearest Refseq: | NR_033907 |
| Nearest Ensembl: | |
| Gene Name: | "FSHD region gene 1 family member J, pseudogene" |
| Gene Alias: | - |
| Gene Description: | "FSHD region gene 1 family member J, pseudogene" |
| Gene Type: | pseudo |
| CpG%: | 0.065 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
