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Difference between revisions of "TSS:Hg 154768.1"

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Line 2: Line 2:
 
|HJMD=
 
|HJMD=
 
|PCAD=
 
|PCAD=
|all_trans=ENST00000566808.2:-26 KJ904433:-285 EU832319:-285 EU832404:-285 AB527800:-286 X63629:-336 ENST00000264012.9:-353 NM_001317196:-353 NM_001793:-353 NM_001317195:-353 AK225396:-353 AK312554:-360 ENST00000542274.5:-362 AK296968:-362
+
|all_trans=HGNC:1754
 
|chr=chr16
 
|chr=chr16
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 24: Line 24:
 
|nearest_refseq=NM_001793
 
|nearest_refseq=NM_001793
 
|nearest_unigene=Hs.191842
 
|nearest_unigene=Hs.191842
|num_trans=14
+
|num_trans=1001
 
|species=human
 
|species=human
 
|start=68645662
 
|start=68645662

Latest revision as of 13:24, 20 July 2021

Basic information about the TSS


TSS ID:hg_154768.1
Species:human
Chr:chr16
TSS Classification:no
Start:68645662
End:68645681
Strand:+
TSS Score:1
Start of the center position in the TSS region:68645671
End of the center position in the TSS region:68645672



Gene and protein annotation


Transcript_name:ENST00000566808.2
Distance:-26
GeneID:1001
HGNC/MGI_ID:HGNC:1754
UniProt_ID:J3KRQ1
Gene_name:cadherin 15
Gene_symbol:CDH15
Gene_synonyms:
Gene_source:HGNC:1754



Transcript annotation


Transcript_name:ENST00000566808.2
Distance:-26
Num_trans:1001
All_trans:HGNC:1754



TATA-Box annotation


Distance to TSS:362
Nearest PromoterID:NM_001793
Entrez ID:1001
Nearest Unigene:Hs.191842
Nearest Refseq:NM_001793
Nearest Ensembl:ENSG00000062038
Gene Name:cadherin 15
Gene Alias:CDHP|HJMD|PCAD
Gene Description:cadherin 3
Gene Type:protein-coding
CpG%:0.075
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):