Difference between revisions of "TSS:Hg 100829.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.185 |distance_to_tss=-91 |entrez_id=375743 |gc_percent=0.766169 |gene_alias=- |gene_description=protein prenyltransferase alpha subunit repeat conta...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001099666:90 ENST00000472967.2:91 uc064tpt.1:91 ENST00000474925.2:95 uc064tps.1:95 ENST00000340434.4:108 uc004ahj.5:108 BC053622:108 ENST00000377200.9:109 uc004ahi.4:109 AL832683:109 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| + | |distance=90 | ||
|distance_to_tss=-91 | |distance_to_tss=-91 | ||
| + | |end=69760052 | ||
|entrez_id=375743 | |entrez_id=375743 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=protein prenyltransferase alpha subunit repeat containing 1 | |gene_description=protein prenyltransferase alpha subunit repeat containing 1 | ||
| − | |gene_name=PTAR1 | + | |gene_id=375743 |
| + | |gene_name=protein prenyltransferase alpha subunit repeat containing 1 | ||
| + | |gene_source=HGNC:30449 | ||
| + | |gene_symbol=PTAR1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30449 | ||
|nearest_ensembl=ENSG00000188647 | |nearest_ensembl=ENSG00000188647 | ||
|nearest_promoter_id=NM_001099666 | |nearest_promoter_id=NM_001099666 | ||
|nearest_refseq=NM_001099666 | |nearest_refseq=NM_001099666 | ||
|nearest_unigene=Hs.744192 | |nearest_unigene=Hs.744192 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=69760049 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001099666 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100829.1 | |tss_id=hg_100829.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q7Z6K3 | ||
}} | }} | ||
Revision as of 18:17, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001099666 |
|---|---|
| Distance: | 90 |
| Num_trans: | 11 |
| All_trans: | NM_001099666:90 ENST00000472967.2:91 uc064tpt.1:91 ENST00000474925.2:95 uc064tps.1:95 ENST00000340434.4:108 uc004ahj.5:108 BC053622:108 ENST00000377200.9:109 uc004ahi.4:109 AL832683:109 |
TATA-Box annotation
| Distance to TSS: | -91 |
|---|---|
| Nearest PromoterID: | NM_001099666 |
| Entrez ID: | 375743 |
| Nearest Unigene: | Hs.744192 |
| Nearest Refseq: | NM_001099666 |
| Nearest Ensembl: | ENSG00000188647 |
| Gene Name: | protein prenyltransferase alpha subunit repeat containing 1 |
| Gene Alias: | - |
| Gene Description: | protein prenyltransferase alpha subunit repeat containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
