Difference between revisions of "TSS:Hg 100855.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=543 |entrez_id=687 |gc_percent=0.577114 |gene_alias=BTEB|BTEB1 |gene_description=Kruppel like factor 9 |gene_name=KLF9 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BTEB1= | ||
| + | |all_trans=ENST00000377126.3:-498 uc004aht.4:-498 D31716:-498 S72504:-498 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=-498 | ||
|distance_to_tss=543 | |distance_to_tss=543 | ||
| + | |end=70414126 | ||
|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=BTEB|BTEB1 | |gene_alias=BTEB|BTEB1 | ||
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
| − | |gene_name=KLF9 | + | |gene_id=687 |
| + | |gene_name=Kruppel-like factor 9 | ||
| + | |gene_source=HGNC:1123 | ||
| + | |gene_symbol=KLF9 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1123 | ||
|nearest_ensembl=ENSG00000119138 | |nearest_ensembl=ENSG00000119138 | ||
|nearest_promoter_id=NM_001206 | |nearest_promoter_id=NM_001206 | ||
|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=70414102 | ||
| + | |strand=- | ||
|tata_box="-55(CCTTTTAAATGT,+,0.00)" | |tata_box="-55(CCTTTTAAATGT,+,0.00)" | ||
| + | |transcript_name=ENST00000377126.3 uc004aht.4 D31716 S72504 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100855.1 | |tss_id=hg_100855.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R260 Q13886 | ||
}} | }} | ||
Revision as of 18:18, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377126.3 uc004aht.4 D31716 S72504 |
|---|---|
| Distance: | -498 |
| Num_trans: | 4 |
| All_trans: | ENST00000377126.3:-498 uc004aht.4:-498 D31716:-498 S72504:-498 |
TATA-Box annotation
| Distance to TSS: | 543 |
|---|---|
| Nearest PromoterID: | NM_001206 |
| Entrez ID: | 687 |
| Nearest Unigene: | Hs.150557 |
| Nearest Refseq: | NM_001206 |
| Nearest Ensembl: | ENSG00000119138 |
| Gene Name: | Kruppel-like factor 9 |
| Gene Alias: | BTEB |
| Gene Description: | Kruppel like factor 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-55(CCTTTTAAATGT,+,0.00)" |
