Difference between revisions of "TSS:Hg 232139.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance=-16 | |distance=-16 | ||
|distance_to_tss=-27 | |distance_to_tss=-27 | ||
| − | |end= | + | |end=121594242 |
|end_of_center_position=121594242 | |end_of_center_position=121594242 | ||
|entrez_id=196051 | |entrez_id=196051 | ||
| Line 26: | Line 26: | ||
|num_trans=37 | |num_trans=37 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=121594241 |
|start_of_center_position=121594241 | |start_of_center_position=121594241 | ||
| − | |strand= | + | |strand=- |
|transcript_name=NM_001144916 AK308621 | |transcript_name=NM_001144916 AK308621 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_232139.1 | |tss_id=hg_232139.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=P21802 | |uniprot_id=P21802 | ||
}} | }} | ||
Revision as of 08:30, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121594241 |
|---|---|
| End of the center position in the TSS region: | 121594242 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001144916 AK308621 |
|---|---|
| Distance: | -16 |
| Num_trans: | 37 |
| All_trans: | NM_001144916:-16 AK308621:-16 ENST00000491111.1:89 ENST00000369061.8:275 NM_001144914:275 NM_023029:275 NM_001144913:275 KP192323:341 KP192324:341 KP192325:341 KP192326:341 KP192327:341 KP192328:341 KP192329:341 KP192330:341 KP192331:341 ENST00000611527.1:355 ENST00000369056.5:401 X56191:401 ENST00000346997.6:413 ENST00000351936.10:413 Z71929:413 M55614:413 KJ896817:422 KR712030:422 KR712031:422 KR712032:422 KR712033:422 AB587574:423 AB084153:425 EF057068:425 AB821309:425 EU826598:425 EU826601:425 EU826599:425 EU826600:425 ENST00000613324.4:478 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_001318166 |
| Entrez ID: | 196051 |
| Nearest Unigene: | Hs.40479 |
| Nearest Refseq: | NM_001030059 |
| Nearest Ensembl: | ENSG00000203805 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | DPPL2|PPAPDC1|PPAPDC1A |
| Gene Description: | phospholipid phosphatase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
