Difference between revisions of "TSS:Hg 232286.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance=8 | |distance=8 | ||
|distance_to_tss=5696 | |distance_to_tss=5696 | ||
| − | |end= | + | |end=47322446 |
|end_of_center_position=47322446 | |end_of_center_position=47322446 | ||
|entrez_id=414241 | |entrez_id=414241 | ||
| Line 26: | Line 26: | ||
|num_trans=8 | |num_trans=8 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=47322445 |
|start_of_center_position=47322445 | |start_of_center_position=47322445 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=ENST00000581492.3 NM_016204 | |transcript_name=ENST00000581492.3 NM_016204 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232286.1 | |tss_id=hg_232286.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9UK05 | |uniprot_id=Q9UK05 | ||
}} | }} | ||
Revision as of 08:33, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 47322445 |
|---|---|
| End of the center position in the TSS region: | 47322446 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000581492.3 NM_016204 |
|---|---|
| Distance: | 8 |
| Num_trans: | 8 |
| All_trans: | ENST00000581492.3:8 NM_016204:8 AK314956:44 AF188285:63 BC069643:141 BC074921:192 EU446620:223 EU446952:223 |
TATA-Box annotation
| Distance to TSS: | 5696 |
|---|---|
| Nearest PromoterID: | NR_027632 |
| Entrez ID: | 414241 |
| Nearest Unigene: | Hs.594331 |
| Nearest Refseq: | NM_001098846 |
| Nearest Ensembl: | ENSG00000165874 |
| Gene Name: | growth differentiation factor 2 |
| Gene Alias: | FAM35B|FAM35BP|FAM35EP|bA38L15.1 |
| Gene Description: | shieldin complex subunit 2 pseudogene 1 |
| Gene Type: | pseudo |
| CpG%: | 0.005 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
