Difference between revisions of "TSS:Hg 232324.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance=-44 | |distance=-44 | ||
|distance_to_tss=1281 | |distance_to_tss=1281 | ||
| − | |end= | + | |end=59177511 |
|end_of_center_position=59177511 | |end_of_center_position=59177511 | ||
|entrez_id=10276 | |entrez_id=10276 | ||
| Line 25: | Line 25: | ||
|num_trans=4 | |num_trans=4 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=59177510 |
|start_of_center_position=59177510 | |start_of_center_position=59177510 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_001143774 AL365474 | |transcript_name=NM_001143774 AL365474 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232324.1 | |tss_id=hg_232324.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q96FC7 | |uniprot_id=Q96FC7 | ||
}} | }} | ||
Revision as of 08:34, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 59177510 |
|---|---|
| End of the center position in the TSS region: | 59177511 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001143774 AL365474 |
|---|---|
| Distance: | -44 |
| Num_trans: | 4 |
| All_trans: | NM_001143774:-44 AL365474:-44 AM393181:80 ENST00000373878.3:-253 |
TATA-Box annotation
| Distance to TSS: | 1281 |
|---|---|
| Nearest PromoterID: | NM_001047160 |
| Entrez ID: | 10276 |
| Nearest Unigene: | Hs.25155 |
| Nearest Refseq: | NM_005863 |
| Nearest Ensembl: | ENSG00000173848 |
| Gene Name: | phytanoyl-CoA 2-hydroxylase interacting protein like |
| Gene Alias: | ARHGEF8|NET1A |
| Gene Description: | neuroepithelial cell transforming 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.288557 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
